RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 BLOC1S6Q9UL45 172 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 SYNPO2Q9UMS6 1093 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 TMX2Q9Y320 296 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 COPG1Q9Y678 874 aaKnown RBP12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 M0QYV0 167 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 ITIH4Q14624 930 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 TMEM132BQ14DG7 1078 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 SRBD1Q8N5C6 995 aaKnown RBP12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 NOA1Q8NC60 698 aaKnown RBP12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 POLD4Q9HCU8 107 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 STARD7Q9NQZ5 370 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 RSPH10B2B2RC85 870 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 SLC16A3O15427 465 aaKnown RBP12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 RSPH10BP0C881 870 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 GCLMP48507 274 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 KDSRQ06136 332 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 MOXD1Q6UVY6 613 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 MMGT1Q8N4V1 131 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 DNERQ8NFT8 737 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 MMTAG2Q9BU76 263 aaKnown RBP12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 ZRANB2O95218 330 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 KITP10721 976 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 S100A5P33763 92 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 PRKCEQ02156 737 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 BTKQ06187 659 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 GFPT1Q06210 699 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 KCNB1Q14721 858 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 FRMD5Q7Z6J6 570 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 IFT43Q96FT9 208 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 KLHL25Q9H0H3 589 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 DCLRE1BQ9H816 532 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 AMACRQ9UHK6 382 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 CHEK2O96017 543 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 TGFB3P10600 412 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 EFTUD2Q15029 972 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 GMCL1P1Q8NEA9 526 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 EME1Q96AY2 570 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 CNBD2Q96M20 576 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 MRIQ9BWK5 157 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 NDEL1Q9GZM8 345 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 KIAA1683Q9H0B3 1180 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 ITSN1Q15811 1721 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 ZNF609O15014 1411 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 CABYRO75952 493 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 ENO1P06733 434 aaKnown RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 YY1P25490 414 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 HSPA13P48723 471 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 AARSP49588 968 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 DYNLT1P63172 113 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 AMPD2Q01433 879 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 TAF1BQ53T94 588 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 SWT1Q5T5J6 900 aaKnown RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 BTNL9Q6UXG8 535 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 TTC30AQ86WT1 665 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 KDM4CQ9H3R0 1056 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 TRABDQ9H4I3 376 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 SYBUQ9NX95 663 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 STMN3Q9NZ72 180 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 HSD17B4P51659 736 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 RPS6P62753 249 aaKnown RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 MAPRE2Q15555 327 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 MAP1SQ66K74 1059 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 ATP11CQ8NB49 1132 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 PBXIP1Q96AQ6 731 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 FHDC1Q9C0D6 1143 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 M0R3G1 203 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 AP3B1O00203 1094 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 WBP4O75554 376 aaKnown RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 CDC27P30260 824 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 DSG1Q02413 1049 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 SGSM1Q2NKQ1 1148 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 KIF19Q2TAC6 998 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 SCG3Q8WXD2 468 aaKnown RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 ZKSCAN4Q969J2 545 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 ASIC4Q96FT7 647 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 SNF8Q96H20 258 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 MED15Q96RN5 788 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 PRPF18Q99633 342 aaKnown RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 EPAS1Q99814 870 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 CNOT8Q9UFF9 292 aaKnown RBP12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 AP4S1Q9Y587 144 aa12.84□□□□□ -0.35
PCDHGA6-201ENST00000517434 SOX5P35711 763 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 GPC5P78333 572 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 PRAMEP78395 509 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 MAP3K10Q02779 954 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 RAB42Q8N4Z0 105 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 ROPN1BQ9BZX4 212 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 ROPN1Q9HAT0 212 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 HMX1Q9NP08 348 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 MEGF6O75095 1541 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 IGSF9BQ9UPX0 1349 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 UPP2O95045 317 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 ACADSBP45954 432 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 RFX5P48382 616 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 EXOSC10Q01780 885 aaKnown RBP12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZBTB41Q5SVQ8 909 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms