RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 BIRC3Q13489 604 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 SCARA3Q6AZY7 606 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 OVOS1Q6IE37 1185 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 LILRA6Q6PI73 481 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 RSPO2Q6UXX9 243 aaPredicted RBP17.48■□□□□ 0.39
YIF1A-209ENST00000494836 SPATA31D4Q6ZUB0 917 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 ZC3H3Q8IXZ2 948 aaKnown RBP17.48■□□□□ 0.39
YIF1A-209ENST00000494836 HDAC7Q8WUI4 952 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 NELFBQ8WX92 580 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 ZNF516Q92618 1163 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 BORCS6Q96GS4 357 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 HPDLQ96IR7 371 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 APOL5Q9BWW9 433 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 OXCT2Q9BYC2 517 aaPredicted RBP17.48■□□□□ 0.39
YIF1A-209ENST00000494836 PLEKHA4Q9H4M7 779 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 CTNND2Q9UQB3 1225 aa17.48■□□□□ 0.39
YIF1A-209ENST00000494836 GRXCR2A6NFK2 248 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 IKBKBO14920 756 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 SLC16A3O15427 465 aaKnown RBP17.47■□□□□ 0.39
YIF1A-209ENST00000494836 MBTPS2O43462 519 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 PHACTR2O75167 634 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 CYP11A1P05108 521 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 BMP1P13497 986 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 ARPP19P56211 112 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 ROR1Q01973 937 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 ENPEPQ07075 957 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 PAK1Q13153 545 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 TRPC3Q13507 836 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 RARS2Q5T160 578 aaKnown RBP17.47■□□□□ 0.39
YIF1A-209ENST00000494836 METTL23Q86XA0 190 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 C12orf76Q8N812 135 aaPredicted RBP17.47■□□□□ 0.39
YIF1A-209ENST00000494836 KREMEN2Q8NCW0 462 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 GDAP2Q9NXN4 497 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 FBXW11Q9UKB1 542 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 USP15Q9Y4E8 981 aaPredicted RBP17.47■□□□□ 0.39
YIF1A-209ENST00000494836 SNX9Q9Y5X1 595 aa17.47■□□□□ 0.39
YIF1A-209ENST00000494836 OR6C75A6NL08 312 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 HUS1O60921 280 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 TRIM49P0CI25 452 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 TRIM49CP0CI26 452 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 CPB1P15086 417 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 ITIH3Q06033 890 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 LIN9Q5TKA1 542 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 TDRD10Q5VZ19 366 aaKnown RBP17.46■□□□□ 0.39
YIF1A-209ENST00000494836 WSCD1Q658N2 575 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 CES5AQ6NT32 575 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 TTI2Q6NXR4 508 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 FOXR2Q6PJQ5 311 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 S1PR5Q9H228 398 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 ADAM7Q9H2U9 754 aa17.46■□□□□ 0.39
YIF1A-209ENST00000494836 WDR27A2RRH5 827 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 CLSTN1O94985 981 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 CST3P01034 146 aaPredicted RBP17.45■□□□□ 0.38
YIF1A-209ENST00000494836 C4BPAP04003 597 aaKnown RBP17.45■□□□□ 0.38
YIF1A-209ENST00000494836 IL9P15248 144 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 SMAD2Q15796 467 aaKnown RBP17.45■□□□□ 0.38
YIF1A-209ENST00000494836 C1orf220Q5T0J3 134 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 TMC5Q6UXY8 1006 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 THEM5Q8N1Q8 247 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 PDCL2Q8N4E4 241 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 TOP6BLQ8N6T0 577 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 MLKLQ8NB16 471 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 ZNF461Q8TAF7 563 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
YIF1A-209ENST00000494836 CEP63Q96MT8 703 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 L1RE1Q9UN81 338 aa17.45■□□□□ 0.38
YIF1A-209ENST00000494836 MTCL1Q9Y4B5 1905 aaKnown RBP17.45■□□□□ 0.38
YIF1A-209ENST00000494836 RFPL2O75678 378 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 ABLIM3O94929 683 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 STAU1O95793 577 aaKnown RBP17.44■□□□□ 0.38
YIF1A-209ENST00000494836 C8AP07357 584 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 ATICP31939 592 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 STX17P56962 302 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 MYL6P60660 151 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 NCOA4Q13772 614 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 CBX2Q14781 532 aaPredicted RBP17.44■□□□□ 0.38
YIF1A-209ENST00000494836 ZACNQ401N2 412 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 TPGS2Q68CL5 300 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 SV2AQ7L0J3 742 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 TMEM86AQ8N2M4 240 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 CMASQ8NFW8 434 aaPredicted RBP17.44■□□□□ 0.38
YIF1A-209ENST00000494836 SUSD6Q92537 303 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 DUSP9Q99956 384 aaKnown RBP17.44■□□□□ 0.38
YIF1A-209ENST00000494836 ZDHHC7Q9NXF8 308 aa17.44■□□□□ 0.38
YIF1A-209ENST00000494836 STX10O60499 249 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 ZMYND10O75800 440 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 ELF1P32519 619 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 GCLMP48507 274 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 TNNC1P63316 161 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 PPP3CAQ08209 521 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 ZNF699Q32M78 642 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 WDR72Q3MJ13 1102 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 DCAF17Q5H9S7 520 aaPredicted RBP17.43■□□□□ 0.38
YIF1A-209ENST00000494836 PPM1LQ5SGD2 360 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 TCERG1LQ5VWI1 586 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 C15orf39Q6ZRI6 1047 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 CCDC149Q6ZUS6 474 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 DPH6Q7L8W6 267 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 ADGRF2Q8IZF7 708 aa17.43■□□□□ 0.38
YIF1A-209ENST00000494836 OR10T2Q8NGX3 314 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms