RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 VNN1O95497 513 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 SPATA31D3P0C874 917 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 TRIM49P0CI25 452 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 TRIM49CP0CI26 452 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 MRPS5P82675 430 aaKnown RBP14.57□□□□□ -0.08
COL1A1-208ENST00000494334 PPP3CAQ08209 521 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 BIRC3Q13489 604 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 TRPC3Q13507 836 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 CLUL1Q15846 466 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 DPCR1Q3MIW9 517 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 ZACNQ401N2 412 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 CCDC183Q5T5S1 534 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 WSCD1Q658N2 575 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 OVOS1Q6IE37 1185 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 C15orf39Q6ZRI6 1047 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 SPATA31D4Q6ZUB0 917 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 S1PR5Q9H228 398 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 GDAP2Q9NXN4 497 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 TMEM63CQ9P1W3 806 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 RWDD2AQ9UIY3 292 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 DSEQ9UL01 958 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 SNX9Q9Y5X1 595 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 XIRP2A4UGR9 3374 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 SCN1AP35498 2009 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 PRUNE2Q8WUY3 3088 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 STAU1O95793 577 aaKnown RBP14.56□□□□□ -0.08
COL1A1-208ENST00000494334 HOXB8P17481 243 aaPredicted RBP14.56□□□□□ -0.08
COL1A1-208ENST00000494334 GCLMP48507 274 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 KCNQ1P51787 676 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 ARPP19P56211 112 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 MYL6P60660 151 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 ROR1Q01973 937 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 AAK1Q2M2I8 961 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 C12orf76Q8N812 135 aaPredicted RBP14.56□□□□□ -0.08
COL1A1-208ENST00000494334 KREMEN2Q8NCW0 462 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 ASB2Q96Q27 587 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 SRRTQ9BXP5 876 aaKnown RBP14.56□□□□□ -0.08
COL1A1-208ENST00000494334 OXCT2Q9BYC2 517 aaPredicted RBP14.56□□□□□ -0.08
COL1A1-208ENST00000494334 XYLT2Q9H1B5 865 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 MAN1C1Q9NR34 630 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 DZANK1Q9NVP4 752 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 CD207Q9UJ71 328 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 L1RE1Q9UN81 338 aa14.56□□□□□ -0.08
COL1A1-208ENST00000494334 REV3LO60673 3130 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 WDR27A2RRH5 827 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 HUS1O60921 280 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 ABLIM3O94929 683 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 ATICP31939 592 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 GTF2H1P32780 548 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 NCOA4Q13772 614 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 SOWAHAQ2M3V2 549 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 DPH6Q7L8W6 267 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 LIMS2Q7Z4I7 341 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 FRMD5Q7Z6J6 570 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 METTL23Q86XA0 190 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 PDCL2Q8N4E4 241 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 TOP6BLQ8N6T0 577 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 SMRP1Q8NCR6 262 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 ZNF461Q8TAF7 563 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 HDAC7Q8WUI4 952 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 SYAP1Q96A49 352 aaPredicted RBP14.55□□□□□ -0.08
COL1A1-208ENST00000494334 TMEM209Q96SK2 561 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 RTP3Q9BQQ7 232 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 APOL5Q9BWW9 433 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 PLEKHA4Q9H4M7 779 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 MMRN2Q9H8L6 949 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 VRTNQ9H8Y1 702 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 METTL14Q9HCE5 456 aaKnown RBP14.55□□□□□ -0.08
COL1A1-208ENST00000494334 TMEM8AQ9HCN3 771 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 ARMCX3Q9UH62 379 aaPredicted RBP14.55□□□□□ -0.08
COL1A1-208ENST00000494334 DPP7Q9UHL4 492 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 FBXW11Q9UKB1 542 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 BRWD1Q9NSI6 2320 aa14.55□□□□□ -0.08
COL1A1-208ENST00000494334 GRXCR2A6NFK2 248 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 OR6C75A6NL08 312 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 MBTPS2O43462 519 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 HLA-DRAP01903 254 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 OR4Q2P0C623 313 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 BMP1P13497 986 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 ERCC5P28715 1186 aaPredicted RBP14.54□□□□□ -0.08
COL1A1-208ENST00000494334 SMAD4Q13485 552 aaKnown RBP14.54□□□□□ -0.08
COL1A1-208ENST00000494334 PUS10Q3MIT2 529 aaKnown RBP14.54□□□□□ -0.08
COL1A1-208ENST00000494334 WDR72Q3MJ13 1102 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 CCDC40Q4G0X9 1142 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 DCAF17Q5H9S7 520 aaPredicted RBP14.54□□□□□ -0.08
COL1A1-208ENST00000494334 TCERG1LQ5VWI1 586 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 KRT39Q6A163 491 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 PTCRAQ6ISU1 281 aaPredicted RBP14.54□□□□□ -0.08
COL1A1-208ENST00000494334 OSTM1Q86WC4 334 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 THEM5Q8N1Q8 247 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 TMEM86AQ8N2M4 240 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 OR10T2Q8NGX3 314 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 FEZF2Q8TBJ5 459 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 TAS1R2Q8TE23 839 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 SLC35C1Q96A29 364 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 ELMO3Q96BJ8 720 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 DACH1Q9UI36 760 aa14.54□□□□□ -0.08
COL1A1-208ENST00000494334 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 GABRDO14764 452 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 STX10O60499 249 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 1153.4 ms