RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 CUL2Q13617 745 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 DGKDQ16760 1214 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 USP38Q8NB14 1042 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 UVRAGQ9P2Y5 699 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 DCTN4Q9UJW0 460 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 LRP6O75581 1613 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 PDE2AO00408 941 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-218ENST00000482171 NDC80O14777 642 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 SLC4A1P02730 911 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 PDGFRAP16234 1089 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 UBA1P22314 1058 aaKnown RBP11.92□□□□□ -0.5
SMPD4-218ENST00000482171 MYL6P60660 151 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 IRX4P78413 519 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 GSDMBQ8TAX9 411 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMPD4-218ENST00000482171 RAPGEF5Q92565 580 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 FAF2Q96CS3 445 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 KLRG1Q96E93 195 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 MROH8Q9H579 483 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 COL20A1Q9P218 1284 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 PPP2R3BQ9Y5P8 575 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 RCCD1A6NED2 376 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 H3BRB1 525 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 MAP3K7O43318 606 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 ESRRAP11474 423 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-218ENST00000482171 RRM1P23921 792 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 ANXA13P27216 316 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 PPM1FP49593 454 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-218ENST00000482171 GTF2A2P52657 109 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 TREML2Q5T2D2 321 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 DNERQ8NFT8 737 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 TUT1Q9H6E5 874 aaKnown RBP11.92□□□□□ -0.5
SMPD4-218ENST00000482171 ASTN1O14525 1302 aa11.92□□□□□ -0.5
SMPD4-218ENST00000482171 FAM153BP0C7A2 387 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 CXCL8P10145 99 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 PAX7P23759 505 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 PBX1P40424 430 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 MRPS9P82933 396 aaKnown RBP11.91□□□□□ -0.5
SMPD4-218ENST00000482171 LAMTOR4Q0VGL1 99 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 MEA1Q16626 185 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 MAP7D1Q3KQU3 841 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 FAM153CQ494X1 144 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 LRIG3Q6UXM1 1119 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 RNF139Q8WU17 664 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 HPDLQ96IR7 371 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 MED15Q96RN5 788 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 SETD4Q9NVD3 440 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 FGFR1OP2Q9NVK5 253 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 IRAK4Q9NWZ3 460 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 FAM153AQ9UHL3 310 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 VAV3Q9UKW4 847 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 UBIAD1Q9Y5Z9 338 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 NID2Q14112 1375 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 SLC12A2P55011 1212 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 BCAR1P56945 870 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 PDE1CQ14123 709 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-218ENST00000482171 KIAA1755Q5JYT7 1200 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 ABTB1Q969K4 478 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-218ENST00000482171 SIK2Q9H0K1 926 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 ISCUQ9H1K1 167 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 IFT122Q9HBG6 1241 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 STOML1Q9UBI4 398 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 DOT1LQ8TEK3 1739 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 NFKBIEO00221 500 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 DDX3XO00571 662 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMPD4-218ENST00000482171 CXCL11O14625 94 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 GYG2O15488 501 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 ASAP2O43150 1006 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 MAP3K6O95382 1288 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 GARTP22102 1010 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 ADORA2AP29274 412 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 RAP1GAPP47736 663 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 CACNB2Q08289 660 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-218ENST00000482171 SEPT6Q14141 434 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 CRYMQ14894 314 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 RFX8Q6ZV50 586 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 CENPUQ71F23 418 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 PARD3BQ8TEW8 1205 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 ATG4AQ8WYN0 398 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 C9orf72Q96LT7 481 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 RRAGCQ9HB90 399 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 SMYD2Q9NRG4 433 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 SNED1Q8TER0 1413 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 IGF2BP3O00425 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMPD4-218ENST00000482171 KIF3CO14782 793 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 MYBL1P10243 752 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 ADCYAP1R1P41586 468 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 SATB1Q01826 763 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 CDR2Q01850 454 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 TFDP2Q14188 446 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 IZUMO3Q5VZ72 239 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 SPATA21Q7Z572 469 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 ATP2A3Q93084 1043 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 CFAP57Q96MR6 1250 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 OSMRQ99650 979 aa11.91□□□□□ -0.5
SMPD4-218ENST00000482171 USP15Q9Y4E8 981 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-218ENST00000482171 ANP32DO95626 131 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 MOCS2O96007 188 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-218ENST00000482171 KRT7P08729 469 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms