RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 EFHC2Q5JST6 749 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 BZW1Q7L1Q6 419 aaKnown RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 BBS5Q8N3I7 341 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 NCAPGQ9BPX3 1015 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 TRIM51Q9BSJ1 452 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 RNPEPQ9H4A4 650 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 LTBP3Q9NS15 1303 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 A0A0G2JLL6 359 aaPredicted RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 A0A0U1RQJ8 604 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 GRID2IPA4D2P6 1211 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 PCSK1P29120 753 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 NOGQ13253 232 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 TMED2Q15363 201 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 PRRT2Q7Z6L0 340 aaPredicted RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 DDX42Q86XP3 938 aaKnown RBP eCLIP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 ZNF677Q86XU0 584 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 CCHCR1Q8TD31 782 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 CDKL2Q92772 493 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 C12orf42Q96LP6 360 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 OSBPL8Q9BZF1 889 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 METTL5Q9NRN9 209 aaKnown RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 MYH14Q7Z406 1995 aaKnown RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 CYB561D2O14569 222 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 ZC3H11AO75152 810 aaKnown RBP eCLIP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 YBX3P16989 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 CDK17Q00537 523 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 CENPUQ71F23 418 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 BRSK2Q8IWQ3 736 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 PLAAQ9Y263 795 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 PQBP1O60828 265 aaKnown RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 KRT14P02533 472 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 HMBSP08397 361 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 TNFSF9P41273 254 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 KCNT1Q5JUK3 1230 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 EEF1DP3Q658K8 133 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 TAF2Q6P1X5 1199 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 SLC27A1Q6PCB7 646 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 EMC1Q8N766 993 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 LENG9Q96B70 501 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 CFAP36Q96G28 342 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 L3MBTL3Q96JM7 780 aaPredicted RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 CALR3Q96L12 384 aaKnown RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 GPR20Q99678 358 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 SPON2Q9BUD6 331 aa12.51□□□□□ -0.41
SGSM3-209ENST00000478085 INTS9Q9NV88 658 aaKnown RBP12.51□□□□□ -0.41
SGSM3-209ENST00000478085 DDX3XO00571 662 aaKnown RBP eCLIP12.5□□□□□ -0.41
SGSM3-209ENST00000478085 MSH2P43246 934 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 PSMD6Q15008 389 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 PHLDB3Q6NSJ2 640 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 LRRC31Q6UY01 552 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 PLPPR4Q7Z2D5 763 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 DEFB128Q7Z7B8 93 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 PLCD4Q9BRC7 762 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 RNF208Q9H0X6 261 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 HMX1Q9NP08 348 aaPredicted RBP12.5□□□□□ -0.41
SGSM3-209ENST00000478085 ABI2Q9NYB9 513 aaPredicted RBP12.5□□□□□ -0.41
SGSM3-209ENST00000478085 MAP3K6O95382 1288 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 MCF2P10911 925 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 ELNP15502 786 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 AP1B1Q10567 949 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 PIGHQ14442 188 aaPredicted RBP12.5□□□□□ -0.41
SGSM3-209ENST00000478085 JADE1Q6IE81 842 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 SHCBP1Q8NEM2 672 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 GIMAP7Q8NHV1 300 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 TXNRD2Q9NNW7 524 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 DDX56Q9NY93 547 aaKnown RBP12.5□□□□□ -0.41
SGSM3-209ENST00000478085 ADAM21Q9UKJ8 722 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 ZNF536O15090 1300 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 ARSEP51690 589 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 KRT17Q04695 432 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 SEPT6Q14141 434 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 MGAT5BQ3V5L5 792 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 FBXO47Q5MNV8 452 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 FYB2Q5VWT5 728 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 HEATR6Q6AI08 1181 aaKnown RBP12.5□□□□□ -0.41
SGSM3-209ENST00000478085 CD302Q8IX05 232 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 BRI3BPQ8WY22 251 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 CFAP57Q96MR6 1250 aa12.5□□□□□ -0.41
SGSM3-209ENST00000478085 SEPT5Q99719 369 aaPredicted RBP12.5□□□□□ -0.41
SGSM3-209ENST00000478085 RRP15Q9Y3B9 282 aaKnown RBP12.5□□□□□ -0.41
SGSM3-209ENST00000478085 SPEF2Q9C093 1822 aa12.49□□□□□ -0.41
SGSM3-209ENST00000478085 LYPLA2O95372 231 aa12.49□□□□□ -0.41
SGSM3-209ENST00000478085 GZMAP12544 262 aa12.49□□□□□ -0.41
SGSM3-209ENST00000478085 H2AFXP16104 143 aaPredicted RBP12.49□□□□□ -0.41
SGSM3-209ENST00000478085 ACAT1P24752 427 aaKnown RBP12.49□□□□□ -0.41
SGSM3-209ENST00000478085 PNPLA4P41247 253 aa12.49□□□□□ -0.41
SGSM3-209ENST00000478085 SULT1E1P49888 294 aa12.49□□□□□ -0.41
SGSM3-209ENST00000478085 EIF3EP60228 445 aaKnown RBP12.49□□□□□ -0.41
SGSM3-209ENST00000478085 PTPN11Q06124 597 aaPredicted RBP12.49□□□□□ -0.41
SGSM3-209ENST00000478085 CCDC6Q16204 474 aa12.49□□□□□ -0.41
SGSM3-209ENST00000478085 VSIG1Q86XK7 387 aa12.49□□□□□ -0.41
SGSM3-209ENST00000478085 LENG1Q96BZ8 264 aaPredicted RBP12.49□□□□□ -0.41
SGSM3-209ENST00000478085 KLC2Q9H0B6 622 aa12.49□□□□□ -0.41
SGSM3-209ENST00000478085 PCDHB7Q9Y5E2 793 aa12.49□□□□□ -0.41
SGSM3-209ENST00000478085 NRCAMQ92823 1304 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms