RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-221ENST00000477561 TMEM221A6NGB7 291 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 ZNF233A6NK53 670 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 M0R296 226 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 OAZ2O95190 189 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 PAPLNO95428 1278 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 RPN1P04843 607 aaKnown RBP8.93□□□□□ -0.98
HDAC6-221ENST00000477561 KRT19P08727 400 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 ATF2P15336 505 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 TAF6P49848 677 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 POU5F1Q01860 360 aaKnown RBP8.93□□□□□ -0.98
HDAC6-221ENST00000477561 FAM160A1Q05DH4 1040 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 SIGLEC14Q08ET2 396 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 MTMR3Q13615 1198 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 ZSCAN23Q3MJ62 389 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 WSCD1Q658N2 575 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 TPGS2Q68CL5 300 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 OVOS1Q6IE37 1185 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 NT5DC4Q86YG4 428 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 CSGALNACT2Q8N6G5 542 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 C1orf127Q8N9H9 656 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 OR5B17Q8NGF7 314 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 ITFG1Q8TB96 612 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 CACTINQ8WUQ7 758 aaKnown RBP8.93□□□□□ -0.98
HDAC6-221ENST00000477561 ING5Q8WYH8 240 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 PBXIP1Q96AQ6 731 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 BORCS6Q96GS4 357 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 MTMR12Q9C0I1 747 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 GZF1Q9H116 711 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-221ENST00000477561 EXOC1Q9NV70 894 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 AFF4Q9UHB7 1163 aaKnown RBP8.93□□□□□ -0.98
HDAC6-221ENST00000477561 USP25Q9UHP3 1055 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 SLC27A5Q9Y2P5 690 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 PTPRJQ12913 1337 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 ANK1P16157 1881 aa8.93□□□□□ -0.98
HDAC6-221ENST00000477561 MTCL1Q9Y4B5 1905 aaKnown RBP8.93□□□□□ -0.98
HDAC6-221ENST00000477561 DENND4AQ7Z401 1863 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 UBE4BO95155 1302 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 FAM237AA0A1B0GTK4 181 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 ARHGEF37A1IGU5 675 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 KPNA7A9QM74 516 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 KIAA0391O15091 583 aaKnown RBP8.92□□□□□ -0.98
HDAC6-221ENST00000477561 NARSO43776 548 aaKnown RBP8.92□□□□□ -0.98
HDAC6-221ENST00000477561 KINO60870 393 aaKnown RBP8.92□□□□□ -0.98
HDAC6-221ENST00000477561 SOAT2O75908 522 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 ZNF202O95125 648 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 VNN2O95498 520 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 PDGFBP01127 241 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-221ENST00000477561 TMEM191BP0C7N4 346 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 DLATP10515 647 aaKnown RBP8.92□□□□□ -0.98
HDAC6-221ENST00000477561 LAMP2P13473 410 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 PTPN2P17706 415 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 TYMPP19971 482 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 HOXA9P31269 272 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 TWF1Q12792 350 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 BFSP1Q12934 665 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 DUSP4Q13115 394 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 GSE1Q14687 1217 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 SNRNP35Q16560 246 aaKnown RBP8.92□□□□□ -0.98
HDAC6-221ENST00000477561 KNOP1Q1ED39 458 aaKnown RBP8.92□□□□□ -0.98
HDAC6-221ENST00000477561 SV2CQ496J9 727 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 PABPC1LQ4VXU2 614 aaKnown RBP8.92□□□□□ -0.98
HDAC6-221ENST00000477561 KRBA2Q6ZNG9 492 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 HS2ST1Q7LGA3 356 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 METTL23Q86XA0 190 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 TCEAL8Q8IYN2 117 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 HS6ST3Q8IZP7 471 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 XXYLT1Q8NBI6 393 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 ATAD1Q8NBU5 361 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 KIAA0895Q8NCT3 520 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 OR10T2Q8NGX3 314 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 FGF13Q92913 245 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 CCDC127Q96BQ5 260 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 ASIC4Q96FT7 647 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 CCDC34Q96HJ3 373 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 ANKRD36BP1Q96IX9 119 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 CORO1BQ9BR76 489 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 NUP62CLQ9H1M0 184 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 CRISPLD1Q9H336 500 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 INTS13Q9NVM9 706 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC6-221ENST00000477561 TMEM63CQ9P1W3 806 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 EPS15L1Q9UBC2 864 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 MRPS23Q9Y3D9 190 aaKnown RBP8.92□□□□□ -0.98
HDAC6-221ENST00000477561 INSL5Q9Y5Q6 135 aa8.92□□□□□ -0.98
HDAC6-221ENST00000477561 OR6C75A6NL08 312 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 EXOC3O60645 756 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 TNNC2P02585 160 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 CYP11A1P05108 521 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 RHOP08100 348 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 TNNI1P19237 187 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 CASP4P49662 377 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 ZNF445P59923 1031 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 RBP5P82980 135 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 PSMD2Q13200 908 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 GPR17Q13304 367 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 TDGQ13569 410 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 SURF1Q15526 300 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 DUOXA2Q1HG44 320 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 BMT2Q1RMZ1 405 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms