RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	NCAPH2	Q6IBW4	605 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	BRAP	Q7Z569	592 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	NEK8	Q86SG6	692 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	PROSER1	Q86XN7	944 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	BPIFB1	Q8TDL5	484 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	DYDC2	Q96IM9	177 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	NUSAP1	Q9BXS6	441 aa	Known RBP	13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	PDZD7	Q9H5P4	517 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	GTSE1	Q9NYZ3	720 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	RGL1	Q9NZL6	768 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	FBXL5	Q9UKA1	691 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	ADAMTS20	P59510	1910 aa		13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	GCN1	Q92616	2671 aa	Known RBP	13.42	□□□□□ -0.26
SBF1-208	ENST00000477234	TRIP11	Q15643	1979 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	UPK3BL1	B0FP48	263 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	UPK3BL2	E5RIL1	263 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	TRDMT1	O14717	391 aa	Known RBP	13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	MOSPD3	O75425	235 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	SLITRK3	O94933	977 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	F13A1	P00488	732 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	PRKCB	P05771	671 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	CPB1	P15086	417 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	SPINK2	P20155	84 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	SOX9	P48436	509 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	MRPL58	Q14197	206 aa	Known RBP	13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	CTTN	Q14247	550 aa	Known RBP	13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	INF2	Q27J81	1249 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	ZNF423	Q2M1K9	1284 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	TMEM196	Q5HYL7	178 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	MCTP1	Q6DN14	999 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	TXNDC11	Q6PKC3	985 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	POTEH	Q6S545	545 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	SYT13	Q7L8C5	426 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	CYP2U1	Q7Z449	544 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	SHKBP1	Q8TBC3	707 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	GCNA	Q96QF7	691 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	NACC1	Q96RE7	527 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	CCDC94	Q9BW85	323 aa	Predicted RBP	13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	FOXP1	Q9H334	677 aa	Predicted RBP	13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	SMOC1	Q9H4F8	434 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	CEP72	Q9P209	647 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	EVL	Q9UI08	416 aa	Predicted RBP	13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	MTMR6	Q9Y217	621 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	GDA	Q9Y2T3	454 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	DMXL2	Q8TDJ6	3036 aa		13.41	□□□□□ -0.26
SBF1-208	ENST00000477234	PHLPP2	Q6ZVD8	1323 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	EML5	Q05BV3	1969 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	THADA	Q6YHU6	1953 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	ATG2B	Q96BY7	2078 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	LAMA1	P25391	3075 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234		A0A1W2PRU2	124 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	FAM221B	A6H8Z2	402 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234		M0R2N6	131 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	SLC37A4	O43826	429 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	CCNT1	O60563	726 aa	Known RBP	13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	SEC24A	O95486	1093 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	KRT2	P35908	639 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	RARRES1	P49788	294 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	ATL3	Q6DD88	541 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	TCEAL6	Q6IPX3	200 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	NOSTRIN	Q8IVI9	506 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	HS6ST3	Q8IZP7	471 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	TCEAL3	Q969E4	200 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	GBP4	Q96PP9	640 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	HSFX1	Q9UBD0	423 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	PI4KA	P42356	2102 aa		13.4	□□□□□ -0.26
SBF1-208	ENST00000477234	SMIM28	A0A1B0GU29	152 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	PODXL	O00592	558 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	BRCC3	P46736	316 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	PXN	P49023	591 aa	Predicted RBP	13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	FOSB	P53539	338 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	UAP1L1	Q3KQV9	507 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	PMS2CL	Q68D20	193 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	PDZD3	Q86UT5	571 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	DIS3L2	Q8IYB7	885 aa	Known RBP	13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	HDDC3	Q8N4P3	179 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	DEPTOR	Q8TB45	409 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	SUSD3	Q96L08	255 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	AIFM3	Q96NN9	605 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	HSD17B14	Q9BPX1	270 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	MKNK1	Q9BUB5	465 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	ATXN3L	Q9H3M9	355 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	TASP1	Q9H6P5	420 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	C2orf42	Q9NWW7	574 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	PCDHA12	Q9UN75	941 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	GPSM3	Q9Y4H4	160 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	ABCA7	Q8IZY2	2146 aa		13.39	□□□□□ -0.27
SBF1-208	ENST00000477234	HELZ2	Q9BYK8	2649 aa	Known RBP	13.38	□□□□□ -0.27
SBF1-208	ENST00000477234	GOLGA6L22	H0YM25	854 aa		13.38	□□□□□ -0.27
SBF1-208	ENST00000477234	CDX4	O14627	284 aa	Predicted RBP	13.38	□□□□□ -0.27
SBF1-208	ENST00000477234	HYAL3	O43820	417 aa	Predicted RBP	13.38	□□□□□ -0.27
SBF1-208	ENST00000477234	GJA1	P17302	382 aa		13.38	□□□□□ -0.27
SBF1-208	ENST00000477234	ATP2B1	P20020	1258 aa		13.38	□□□□□ -0.27

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