RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 GJB5O95377 273 aa22.56■■□□□ 1.2
VPS13B-204ENST00000441350 PRKCIP41743 596 aa22.56■■□□□ 1.2
VPS13B-204ENST00000441350 YWHAEP62258 255 aaKnown RBP22.56■■□□□ 1.2
VPS13B-204ENST00000441350 CCZ1BP86790 482 aa22.56■■□□□ 1.2
VPS13B-204ENST00000441350 CCZ1P86791 482 aaPredicted RBP22.56■■□□□ 1.2
VPS13B-204ENST00000441350 GPIHBP1Q8IV16 184 aa22.56■■□□□ 1.2
VPS13B-204ENST00000441350 CMTR2Q8IYT2 770 aaKnown RBP22.56■■□□□ 1.2
VPS13B-204ENST00000441350 CCDC112Q8NEF3 446 aa22.56■■□□□ 1.2
VPS13B-204ENST00000441350 ZNF830Q96NB3 372 aaPredicted RBP22.56■■□□□ 1.2
VPS13B-204ENST00000441350 PCDHB4Q9Y5E5 795 aa22.56■■□□□ 1.2
VPS13B-204ENST00000441350 ITGB1P05556 798 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 CD58P19256 250 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 CLCN1P35523 988 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 USP8P40818 1118 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 MAGEA10P43363 369 aaPredicted RBP22.55■■□□□ 1.2
VPS13B-204ENST00000441350 OR1G1P47890 313 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 ZNF132P52740 706 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 HTRA4P83105 476 aaPredicted RBP22.55■■□□□ 1.2
VPS13B-204ENST00000441350 ARID5AQ03989 594 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 INCA1Q0VD86 236 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 TIGD5Q53EQ6 642 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 HS1BP3Q53T59 392 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 DPH6Q7L8W6 267 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 TTC39CQ8N584 583 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 TOP6BLQ8N6T0 577 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 PHOSPHO2Q8TCD6 241 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 SENP8Q96LD8 212 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 CHP1Q99653 195 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 CWH43Q9H720 699 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 SLC4A7Q9Y6M7 1214 aa22.55■■□□□ 1.2
VPS13B-204ENST00000441350 F8W810 466 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 CYB561D2O14569 222 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 NRP1O14786 923 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 CYP26A1O43174 497 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 TACC1O75410 805 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 ALDH2P05091 517 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 SERPING1P05155 500 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 FAM163BP0C2L3 166 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 CCDC172P0C7W6 258 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 SKILP12757 684 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 KRT5P13647 590 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 SLC11A1P49279 550 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 TMEM270Q6UE05 265 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 SLC9A7Q96T83 725 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 MRPL45Q9BRJ2 306 aaKnown RBP22.54■■□□□ 1.2
VPS13B-204ENST00000441350 MTIF3Q9H2K0 278 aaKnown RBP22.54■■□□□ 1.2
VPS13B-204ENST00000441350 ARHGAP20Q9P2F6 1191 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 L1RE1Q9UN81 338 aa22.54■■□□□ 1.2
VPS13B-204ENST00000441350 BZW2Q9Y6E2 419 aaKnown RBP22.54■■□□□ 1.2
VPS13B-204ENST00000441350 HUS1O60921 280 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 CILPO75339 1184 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 GALTP07902 379 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 CYP26C1Q6V0L0 522 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 TMTC1Q8IUR5 882 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 APPL2Q8NEU8 664 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 WHAMMQ8TF30 809 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 KBTBD7Q8WVZ9 684 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 SUSD3Q96L08 255 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 BARX2Q9UMQ3 279 aaPredicted RBP22.53■■□□□ 1.2
VPS13B-204ENST00000441350 PRG3Q9Y2Y8 225 aaPredicted RBP22.53■■□□□ 1.2
VPS13B-204ENST00000441350 M0QZQ0 153 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 PLEKP08567 350 aaPredicted RBP22.53■■□□□ 1.2
VPS13B-204ENST00000441350 BCAR1P56945 870 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 KLHL30Q0D2K2 578 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 BTG3Q14201 252 aaPredicted RBP22.53■■□□□ 1.2
VPS13B-204ENST00000441350 HERC6Q8IVU3 1022 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 PDCL2Q8N4E4 241 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 RBBP8NLQ8NC74 664 aaPredicted RBP22.53■■□□□ 1.2
VPS13B-204ENST00000441350 HASPINQ8TF76 798 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 YME1L1Q96TA2 773 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 COLEC11Q9BWP8 271 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 MARCH5Q9NX47 278 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 FAN1Q9Y2M0 1017 aa22.53■■□□□ 1.2
VPS13B-204ENST00000441350 BRCC3P46736 316 aa22.52■■□□□ 1.2
VPS13B-204ENST00000441350 MAPK8IP2Q13387 824 aaPredicted RBP22.52■■□□□ 1.2
VPS13B-204ENST00000441350 DSTYKQ6XUX3 929 aa22.52■■□□□ 1.2
VPS13B-204ENST00000441350 SLC47A2Q86VL8 602 aa22.52■■□□□ 1.2
VPS13B-204ENST00000441350 SYT11Q9BT88 431 aa22.52■■□□□ 1.2
VPS13B-204ENST00000441350 HAUS4Q9H6D7 363 aa22.52■■□□□ 1.2
VPS13B-204ENST00000441350 ACP6Q9NPH0 428 aa22.52■■□□□ 1.2
VPS13B-204ENST00000441350 I3L4J1 428 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 ATP2A2P16615 1042 aaKnown RBP22.51■■□□□ 1.19
VPS13B-204ENST00000441350 WARSP23381 471 aaKnown RBP22.51■■□□□ 1.19
VPS13B-204ENST00000441350 RAD23BP54727 409 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 BPIFB4P59827 614 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 PTK2Q05397 1052 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 WSCD1Q658N2 575 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 ADGRF2Q8IZF7 708 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 TMEM86AQ8N2M4 240 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 EPS8L1Q8TE68 723 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 HMGXB4Q9UGU5 601 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 ADAM28Q9UKQ2 775 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 INSL6Q9Y581 213 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 NME7Q9Y5B8 376 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 MRPL42Q9Y6G3 142 aaKnown RBP22.51■■□□□ 1.19
VPS13B-204ENST00000441350 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.51■■□□□ 1.19
VPS13B-204ENST00000441350 CEP290O15078 2479 aa22.51■■□□□ 1.19
VPS13B-204ENST00000441350 SSU72P8A0A1W2PR75 194 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 SOWAHDA6NJG2 315 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 GABRDO14764 452 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms