RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PJA2O43164 708 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 GCNT1Q02742 428 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 MEA1Q16626 185 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 CEP120Q8N960 986 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 SMYD2Q9NRG4 433 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 PCDHB8Q9UN66 801 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 FAM200BP0CF97 657 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
PTCH1-208ENST00000430669 PDK1Q15118 436 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 OSBPL8Q9BZF1 889 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-208ENST00000430669 RBM12Q9NTZ6 932 aaKnown RBP12.13□□□□□ -0.47
PTCH1-208ENST00000430669 PSD3Q9NYI0 1048 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 BFARQ9NZS9 450 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 MANSC4A6NHS7 340 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-208ENST00000430669 VSNL1P62760 191 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 PDIA2Q13087 525 aaKnown RBP12.13□□□□□ -0.47
PTCH1-208ENST00000430669 SEPT6Q14141 434 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 SLC30A10Q6XR72 485 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 TJP2Q9UDY2 1190 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 SNX9Q9Y5X1 595 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 GLB1LQ6UWU2 654 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 RASSF3Q86WH2 238 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 ZSWIM1Q9BR11 485 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 HAUS8Q9BT25 410 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 PCSK1NQ9UHG2 260 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 ALDH1A1P00352 501 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 FUT2Q10981 343 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 TRIM15Q9C019 465 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 TMEM134Q9H6X4 195 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 TRIM10Q9UDY6 481 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 CARNS1A5YM72 827 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 MEIS2O14770 477 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 SLC2A3P11169 496 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 ZBED8Q8IZ13 594 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 SPATA18Q8TC71 538 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 ASAP3Q8TDY4 903 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 C1orf54Q8WWF1 131 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 PNMA5Q96PV4 448 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 TMEM117Q9H0C3 514 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 TADA2AO75478 443 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 GOLGA7BQ2TAP0 167 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 SLC9A9Q8IVB4 645 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 PCSK9Q8NBP7 692 aaKnown RBP12.13□□□□□ -0.47
PTCH1-208ENST00000430669 STKLD1Q8NE28 680 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 PLEKHA5Q9HAU0 1116 aa12.13□□□□□ -0.47
PTCH1-208ENST00000430669 PDGFRAP16234 1089 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 BCAT1P54687 386 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 EXD1Q8NHP7 514 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 EFHD1Q9BUP0 239 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 EML4Q9HC35 981 aaKnown RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 ITGB3P05106 788 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 SERPINB9P50453 376 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 RTP1P59025 263 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 LRRC37BQ96QE4 947 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 EPN3Q9H201 632 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 NDE1Q9NXR1 346 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 KLRC1P26715 233 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 SPATA20Q8TB22 786 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 SDCCAG3Q96C92 435 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 LRGUKQ96M69 825 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 CDK5RAP1Q96SZ6 601 aaKnown RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 PSMC3IPQ9P2W1 217 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 XPO7Q9UIA9 1087 aaKnown RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 FOXN3O00409 490 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 DYNC1LI2O43237 492 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 EPHB1P54762 984 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 NLRP11P59045 1033 aaKnown RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 FKBP1BP68106 108 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 MAPK7Q13164 816 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 NAA25Q14CX7 972 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 TAB3Q8N5C8 712 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 GPATCH11Q8N954 259 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 MTMR12Q9C0I1 747 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 ANGPTL3Q9Y5C1 460 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 GPC4O75487 556 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 VDRP11473 427 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 BOLA3Q53S33 107 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 RNF219Q5W0B1 726 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 NUGGCQ68CJ6 796 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 KSR1Q8IVT5 923 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 RYBPQ8N488 228 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 CERS5Q8N5B7 392 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 C3orf20Q8ND61 904 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 FAM8A1Q9UBU6 413 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 PCDHB7Q9Y5E2 793 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 A0A087X0T9 212 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 PIK3R2O00459 728 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 NPTXRO95502 500 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 FAM228BP0C875 321 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 HUNKP57058 714 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 UGP2Q16851 508 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 LMBRD2Q68DH5 695 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-208ENST00000430669 C1orf186Q6ZWK4 172 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 KIFC3Q9BVG8 833 aa12.12□□□□□ -0.47
PTCH1-208ENST00000430669 BTNL10A8MVZ5 291 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 ARPP19P56211 112 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 TGS1Q96RS0 853 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms