RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 ATF7IP2Q5U623 682 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 C4orf19Q8IY42 314 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 TATDN2Q93075 761 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 RANBP17Q9H2T7 1088 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 CYP4F11Q9HBI6 524 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 VCX3AQ9NNX9 186 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 METTL5Q9NRN9 209 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 BFARQ9NZS9 450 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 DDX20Q9UHI6 824 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 SNX9Q9Y5X1 595 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 PFDN6O15212 129 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 SH3BP5O60239 455 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 ZC3H11AO75152 810 aaKnown RBP eCLIP12.28□□□□□ -0.443e-10■■□□□ 12.7
COPA-202ENST00000368069 VIL1P09327 827 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 RPL21P46778 160 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 KDSRQ06136 332 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 ITIH4Q14624 930 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 CLEC16AQ2KHT3 1053 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 MDH1BQ5I0G3 518 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 EFHC2Q5JST6 749 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 PCNX4Q63HM2 1172 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 TWF2Q6IBS0 349 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 RGS9BPQ6ZS82 235 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 CDR2LQ86X02 465 aaPredicted RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 PPIL6Q8IXY8 311 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 MSL3Q8N5Y2 521 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 FAM71DQ8N9W8 422 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 SYTL5Q8TDW5 730 aaPredicted RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 RNF139Q8WU17 664 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 DDX27Q96GQ7 796 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 NOD2Q9HC29 1040 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 INPP5FQ9Y2H2 1132 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 NID2Q14112 1375 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 TMEM150BA6NC51 233 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 KIF3CO14782 793 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 PROSCO94903 275 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 TTC4O95801 387 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 ENO1P06733 434 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 SLURP2P0DP57 97 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 PYGMP11217 842 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 RBP5P82980 135 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 TMEM132DQ14C87 1099 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 ECM1Q16610 540 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 COBLL1Q53SF7 1204 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 HSP90AA5PQ58FG0 334 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 KCNV1Q6PIU1 500 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 RYBPQ8N488 228 aaPredicted RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 TRIM56Q9BRZ2 755 aaKnown RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 DEFB129Q9H1M3 183 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 KCNQ5Q9NR82 932 aa12.28□□□□□ -0.44
COPA-202ENST00000368069 MARCOQ9UEW3 520 aaPredicted RBP12.28□□□□□ -0.44
COPA-202ENST00000368069 TNFRSF8P28908 595 aa12.27□□□□□ -0.44
COPA-202ENST00000368069 RBBP5Q15291 538 aaKnown RBP12.27□□□□□ -0.44
COPA-202ENST00000368069 ATXN7L3BQ96GX2 97 aa12.27□□□□□ -0.44
COPA-202ENST00000368069 TSC22D3Q99576 134 aa12.27□□□□□ -0.44
COPA-202ENST00000368069 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.27□□□□□ -0.44
COPA-202ENST00000368069 ASTN1O14525 1302 aa12.27□□□□□ -0.44
COPA-202ENST00000368069 H3BRJ5 948 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 MEIS2O14770 477 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 ALDH18A1P54886 795 aaKnown RBP12.27□□□□□ -0.45
COPA-202ENST00000368069 ANGEL2Q5VTE6 544 aaKnown RBP12.27□□□□□ -0.45
COPA-202ENST00000368069 BBS5Q8N3I7 341 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 PIP4K2CQ8TBX8 421 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 RSAD1Q9HA92 442 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 SLC24A3Q9HC58 644 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 NDE1Q9NXR1 346 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 ZFATQ9P243 1243 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 ATP8B3O60423 1300 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 TISP43B9A030 160 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 RIPK2O43353 540 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 HNRNPCL1O60812 293 aaKnown RBP12.27□□□□□ -0.45
COPA-202ENST00000368069 CCND1P24385 295 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 ELF1P32519 619 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 CTCFP49711 727 aaPredicted RBP12.27□□□□□ -0.45
COPA-202ENST00000368069 GEMIN4P57678 1058 aaKnown RBP12.27□□□□□ -0.45
COPA-202ENST00000368069 AP2B1P63010 937 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 PID1Q7Z2X4 250 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 SAMD7Q7Z3H4 446 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 ST13P4Q8IZP2 240 aaPredicted RBP12.27□□□□□ -0.45
COPA-202ENST00000368069 AGBL3Q8NEM8 1001 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 UBA3Q8TBC4 463 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 EXT2Q93063 718 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 PDCD2LQ9BRP1 358 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 IDI2Q9BXS1 227 aa12.27□□□□□ -0.45
COPA-202ENST00000368069 MYL3P08590 195 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 DDR1Q08345 913 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 C1orf186Q6ZWK4 172 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 CCNYL1Q8N7R7 359 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 DTX3LQ8TDB6 740 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 EFHD1Q9BUP0 239 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 MTMR12Q9C0I1 747 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 PCMTD2Q9NV79 361 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 TAS2R14Q9NYV8 317 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 FNDC3AQ9Y2H6 1198 aaKnown RBP12.26□□□□□ -0.45
COPA-202ENST00000368069 RARAP10276 462 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 IER5Q5VY09 327 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 KLC3Q6P597 504 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 ACAD11Q709F0 780 aa12.26□□□□□ -0.45
COPA-202ENST00000368069 SMARCAD1Q9H4L7 1026 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms