RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 RPS6KC1Q96S38 1066 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 ANKRD62A6NC57 917 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 THAP12O43422 761 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 BUB1O43683 1085 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 CILPO75339 1184 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 CFHP08603 1231 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 INCA1Q0VD86 236 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 RNF169Q8NCN4 708 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 ZNF606Q8WXB4 792 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 PGBD4Q96DM1 585 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 NOX5Q96PH1 765 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 MMS19Q96T76 1030 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 FAM124BQ9H5Z6 455 aaPredicted RBP24.74■■□□□ 1.55
SDF4-202ENST00000360001 RSAD1Q9HA92 442 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 SLC38A7Q9NVC3 462 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 MYH10P35580 1976 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 ABCB4P21439 1286 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 RAD23BP54727 409 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 TRIM58Q8NG06 486 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 ZSWIM1Q9BR11 485 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 THAP2Q9H0W7 228 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 HMGXB4Q9UGU5 601 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 SNX9Q9Y5X1 595 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 A0A0A6YYK5 440 aaPredicted RBP24.73■■□□□ 1.55
SDF4-202ENST00000360001 C9IYK1 514 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 TACC1O75410 805 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 CYP1A1P04798 512 aaPredicted RBP24.73■■□□□ 1.55
SDF4-202ENST00000360001 THP07101 528 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 UNGP13051 313 aaPredicted RBP24.73■■□□□ 1.55
SDF4-202ENST00000360001 GJA8P48165 433 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 CTCFP49711 727 aaPredicted RBP24.73■■□□□ 1.55
SDF4-202ENST00000360001 SCNN1GP51170 649 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 CTNNBL1Q8WYA6 563 aaPredicted RBP24.73■■□□□ 1.55
SDF4-202ENST00000360001 ZNF560Q96MR9 790 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 TWNKQ96RR1 684 aa24.73■■□□□ 1.55
SDF4-202ENST00000360001 PUF60Q9UHX1 559 aaKnown RBP24.73■■□□□ 1.55
SDF4-202ENST00000360001 NCANO14594 1321 aa24.72■■□□□ 1.55
SDF4-202ENST00000360001 SPTLC1O15269 473 aa24.72■■□□□ 1.55
SDF4-202ENST00000360001 HSPA1AP0DMV8 641 aaKnown RBP24.72■■□□□ 1.55
SDF4-202ENST00000360001 HSPA1BP0DMV9 641 aaKnown RBP24.72■■□□□ 1.55
SDF4-202ENST00000360001 PNPLA4P41247 253 aa24.72■■□□□ 1.55
SDF4-202ENST00000360001 TRIM60Q495X7 471 aa24.72■■□□□ 1.55
SDF4-202ENST00000360001 C1orf53Q5VUE5 145 aa24.72■■□□□ 1.55
SDF4-202ENST00000360001 ACAD10Q6JQN1 1059 aa24.72■■□□□ 1.55
SDF4-202ENST00000360001 TFAP2BQ92481 460 aa24.72■■□□□ 1.55
SDF4-202ENST00000360001 ARHGEF26Q96DR7 871 aa24.72■■□□□ 1.55
SDF4-202ENST00000360001 NAPGQ99747 312 aaPredicted RBP24.72■■□□□ 1.55
SDF4-202ENST00000360001 ELOVL4Q9GZR5 314 aa24.72■■□□□ 1.55
SDF4-202ENST00000360001 UBN1Q9NPG3 1134 aa24.72■■□□□ 1.55
SDF4-202ENST00000360001 CTAGE9A4FU28 777 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 PAEPP09466 180 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 IBSPP21815 317 aaPredicted RBP24.71■■□□□ 1.55
SDF4-202ENST00000360001 BRD2P25440 801 aaKnown RBP24.71■■□□□ 1.55
SDF4-202ENST00000360001 TLE2Q04725 743 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 FAAP100Q0VG06 881 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 SLC24A5Q71RS6 500 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 SLC4A11Q8NBS3 891 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 TOX2Q96NM4 488 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 TSPYL2Q9H2G4 693 aaPredicted RBP24.71■■□□□ 1.55
SDF4-202ENST00000360001 BARX2Q9UMQ3 279 aaPredicted RBP24.71■■□□□ 1.55
SDF4-202ENST00000360001 TANC1Q9C0D5 1861 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 TAF6P49848 677 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 NAP1L1P55209 391 aaKnown RBP24.71■■□□□ 1.55
SDF4-202ENST00000360001 PLEKHG4Q58EX7 1191 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 TRIM72Q6ZMU5 477 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 TTC39CQ8N584 583 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 CYFIP2Q96F07 1278 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 FTHL17Q9BXU8 183 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 PDCL3Q9H2J4 239 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 GDAP2Q9NXN4 497 aa24.71■■□□□ 1.55
SDF4-202ENST00000360001 DCDC2CA8MYV0 355 aa24.7■■□□□ 1.54
SDF4-202ENST00000360001 KPNA7A9QM74 516 aa24.7■■□□□ 1.54
SDF4-202ENST00000360001 URI1O94763 535 aaPredicted RBP24.7■■□□□ 1.54
SDF4-202ENST00000360001 SSTR3P32745 418 aaPredicted RBP24.7■■□□□ 1.54
SDF4-202ENST00000360001 FAM189BP81408 668 aa24.7■■□□□ 1.54
SDF4-202ENST00000360001 ORC1Q13415 861 aa24.7■■□□□ 1.54
SDF4-202ENST00000360001 RFFLQ8WZ73 363 aa24.7■■□□□ 1.54
SDF4-202ENST00000360001 TMEM176AQ96HP8 235 aa24.7■■□□□ 1.54
SDF4-202ENST00000360001 ALS2CR12Q96Q35 445 aa24.7■■□□□ 1.54
SDF4-202ENST00000360001 PCDHGC5Q9Y5F6 944 aa24.7■■□□□ 1.54
SDF4-202ENST00000360001 NDST1P52848 882 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 NOMO3P69849 1222 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 SOWAHAQ2M3V2 549 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 SV2CQ496J9 727 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 NAA35Q5VZE5 725 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 PASD1Q8IV76 773 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 ANKLE1Q8NAG6 615 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 DBF4BQ8NFT6 615 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 MRPL45Q9BRJ2 306 aaKnown RBP24.69■■□□□ 1.54
SDF4-202ENST00000360001 HIPK3Q9H422 1215 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 L2HGDHQ9H9P8 463 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 CACNG4Q9UBN1 327 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 RIOK3O14730 519 aaKnown RBP24.69■■□□□ 1.54
SDF4-202ENST00000360001 LILRA4P59901 499 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 GPC5P78333 572 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 CENPCQ03188 943 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 LIMS2Q7Z4I7 341 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 CPA5Q8WXQ8 436 aa24.69■■□□□ 1.54
SDF4-202ENST00000360001 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.69■■□□□ 1.54
SDF4-202ENST00000360001 TET1Q8NFU7 2136 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms