RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 CDC23Q9UJX2 597 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 CYP46A1Q9Y6A2 500 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 SLX4Q8IY92 1834 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 MYH14Q7Z406 1995 aaKnown RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 MUC3AQ02505 3323 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PIK3R4Q99570 1358 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 BTBD11A6QL63 1104 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 K7EPI3 171 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 IFNL4K9M1U5 179 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 DKC1O60832 514 aaKnown RBP eCLIP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 BRI3O95415 125 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PRLP01236 227 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 POLBP06746 335 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 AKR1B1P15121 316 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 RUNX1T1Q06455 604 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 LMOD3Q0VAK6 560 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 TFCP2Q12800 502 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 RAB30Q15771 203 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 RGL3Q3MIN7 710 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 ZNF628Q5EBL2 1059 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 TDRD7Q8NHU6 1098 aaKnown RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 TBC1D22AQ8WUA7 517 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 ZUFSPQ96AP4 578 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PREBQ9HCU5 417 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PI4KBQ9UBF8 816 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 ABCF2Q9UG63 623 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PRSS50Q9UI38 385 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 RRN3P2A6NIE6 340 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 SIGLEC6O43699 453 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 RRP9O43818 475 aaKnown RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 SOAT2O75908 522 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 LETM1O95202 739 aaPredicted RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 JUPP14923 745 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 CFAP221Q4G0U5 840 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 TRAT1Q6PIZ9 186 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 CENPTQ96BT3 561 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 SLC41A2Q96JW4 573 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 MIR1-1HGQ9H1L0 117 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 OR10A4Q9H209 315 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 C19orf44Q9H6X5 657 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 KCND1Q9NSA2 647 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 FLRT1Q9NZU1 646 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PLA2G1BP04054 148 aaKnown RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 MAPTP10636 758 aaKnown RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 JAM2P57087 298 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 TARDBPQ13148 414 aaKnown RBP eCLIP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 ADGRE1Q14246 886 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 ADRM1Q16186 407 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 MEX3BQ6ZN04 569 aaKnown RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 ADIPOR2Q86V24 386 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 DENND1CQ8IV53 801 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 DUSP19Q8WTR2 217 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 SPATS2LQ9NUQ6 558 aaKnown RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 SH2B3Q9UQQ2 575 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 LIPT1Q9Y234 373 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 FRMD4BQ9Y2L6 1034 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 RNF115Q9Y4L5 304 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PRSS38A1L453 326 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 NRP1O14786 923 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 SLC16A6O15403 523 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 VNN2O95498 520 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 ANK1P16157 1881 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 HSD17B4P51659 736 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 COPS2P61201 443 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 OS9Q13438 667 aaPredicted RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PDE3AQ14432 1141 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PKN1Q16512 942 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 DDB1Q16531 1140 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 SETMARQ53H47 684 aaPredicted RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 ASPHD1Q5U4P2 390 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PM20D1Q6GTS8 502 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 NFRKBQ6P4R8 1299 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 RIOX2Q8IUF8 465 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 FTSJ3Q8IY81 847 aaKnown RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 CNTROBQ8N137 903 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 VPS52Q8N1B4 723 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 MRPL50Q8N5N7 158 aaKnown RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 NEK9Q8TD19 979 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 LENG9Q96B70 501 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 AHCYL2Q96HN2 611 aaKnown RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 WDR90Q96KV7 1748 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 FAM20AQ96MK3 541 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PCED1AQ9H1Q7 454 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 KCNH6Q9H252 994 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 CYP4F11Q9HBI6 524 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 PCDHA8Q9Y5H6 950 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 GPR45Q9Y5Y3 372 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 EPN1Q9Y6I3 576 aaPredicted RBP2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 AKAP11Q9UKA4 1901 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 SBNO1A3KN83 1393 aa2.16□□□□□ -2.06
SMARCAD1-202ENST00000359052 KLHL33A6NCF5 533 aa2.15□□□□□ -2.06
SMARCAD1-202ENST00000359052 SH2B2O14492 632 aaPredicted RBP2.15□□□□□ -2.06
SMARCAD1-202ENST00000359052 FOXD2O60548 495 aaPredicted RBP2.15□□□□□ -2.06
SMARCAD1-202ENST00000359052 ABHD16AO95870 558 aa2.15□□□□□ -2.06
SMARCAD1-202ENST00000359052 SLC12A3P55017 1021 aa2.15□□□□□ -2.06
SMARCAD1-202ENST00000359052 PCLAFQ15004 111 aa2.15□□□□□ -2.06
SMARCAD1-202ENST00000359052 SUZ12Q15022 739 aaKnown RBP2.15□□□□□ -2.06
SMARCAD1-202ENST00000359052 MMEL1Q495T6 779 aa2.15□□□□□ -2.06
SMARCAD1-202ENST00000359052 VWA3BQ502W6 1294 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms