RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ENPP3O14638 875 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 POLR3GO15318 223 aaPredicted RBP15.72■□□□□ 0.11
CXCL12-201ENST00000343575 STAU1O95793 577 aaKnown RBP15.72■□□□□ 0.11
CXCL12-201ENST00000343575 CLTBP09497 229 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 WEE2P0C1S8 567 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 CYP3A5P20815 502 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 GNG11P61952 73 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 GFPT1Q06210 699 aaPredicted RBP15.72■□□□□ 0.11
CXCL12-201ENST00000343575 WDR72Q3MJ13 1102 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 NECAB2Q7Z6G3 386 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 SLC47A2Q86VL8 602 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 CRIPAKQ8N1N5 446 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 BEST2Q8NFU1 509 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 JAKMIP2Q96AA8 810 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 TRIM43Q96BQ3 446 aaPredicted RBP15.72■□□□□ 0.11
CXCL12-201ENST00000343575 EIF3CQ99613 913 aaKnown RBP15.72■□□□□ 0.11
CXCL12-201ENST00000343575 IMPG2Q9BZV3 1241 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 NXF1Q9UBU9 619 aaKnown RBP15.72■□□□□ 0.11
CXCL12-201ENST00000343575 ADAMTS1Q9UHI8 967 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 NOCTQ9UK39 431 aaKnown RBP15.72■□□□□ 0.11
CXCL12-201ENST00000343575 NENFQ9UMX5 172 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 SPTLC1O15269 473 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 INPPL1O15357 1258 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 ERLIN1O75477 346 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 TBXAS1P24557 533 aaPredicted RBP15.71■□□□□ 0.11
CXCL12-201ENST00000343575 ATICP31939 592 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 SCNN1GP51170 649 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 RNF169Q8NCN4 708 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 SLC30A5Q8TAD4 765 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 EPS8L1Q8TE68 723 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 SLC20A1Q8WUM9 679 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 DDX1Q92499 740 aaKnown RBP15.71■□□□□ 0.11
CXCL12-201ENST00000343575 FAM81BQ96LP2 452 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 FTHL17Q9BXU8 183 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 RSAD1Q9HA92 442 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 TMEM39AQ9NV64 488 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 TFR2Q9UP52 801 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 BZW2Q9Y6E2 419 aaKnown RBP15.71■□□□□ 0.11
CXCL12-201ENST00000343575 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.71■□□□□ 0.11
CXCL12-201ENST00000343575 RCCD1A6NED2 376 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 DDX3XO00571 662 aaKnown RBP eCLIP15.71■□□□□ 0.11
CXCL12-201ENST00000343575 CHRNB2P17787 502 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 IBSPP21815 317 aaPredicted RBP15.71■□□□□ 0.11
CXCL12-201ENST00000343575 LRPAP1P30533 357 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 USP8P40818 1118 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 ZNF132P52740 706 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 CDH8P55286 799 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 ZSCAN26Q16670 478 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 ZNF667Q5HYK9 610 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 NOP9Q86U38 636 aaKnown RBP15.71■□□□□ 0.11
CXCL12-201ENST00000343575 PALB2Q86YC2 1186 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 HACE1Q8IYU2 909 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 CEP112Q8N8E3 955 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 LNX1Q8TBB1 728 aaPredicted RBP15.71■□□□□ 0.11
CXCL12-201ENST00000343575 FUT8Q9BYC5 575 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 RASSF4Q9H2L5 321 aa15.71■□□□□ 0.11
CXCL12-201ENST00000343575 TTC3P53804 2025 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 MAP2K7O14733 419 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 EOMESO95936 686 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 SKIP12755 728 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 CYLC1P35663 651 aaPredicted RBP15.7■□□□□ 0.1
CXCL12-201ENST00000343575 RAP1GAPP47736 663 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 SLC18A3Q16572 532 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 CLLU1OSQ5K130 101 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 SCARA5Q6ZMJ2 495 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 LRRC52Q8N7C0 313 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 SEPT8Q92599 483 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 FAXDC2Q96IV6 333 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 PARD6BQ9BYG5 372 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 SMYD3Q9H7B4 428 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 CISHQ9NSE2 258 aa15.7■□□□□ 0.1
CXCL12-201ENST00000343575 AKR1B10O60218 316 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 B4GALT3O60512 393 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 THP07101 528 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 CCDC175P0C221 793 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 CYP11B1P15538 503 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 ARHGAP25P42331 645 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 TMEM270Q6UE05 265 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 DEFB128Q7Z7B8 93 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 DNAAF5Q86Y56 855 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 GLYCTKQ8IVS8 523 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 WHAMMQ8TF30 809 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 PGBD4Q96DM1 585 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 PCDHB18PQ96TA0 734 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 PAAF1Q9BRP4 392 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 PARNO95453 639 aaKnown RBP15.69■□□□□ 0.1
CXCL12-201ENST00000343575 POMCP01189 267 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 FGFR1P11362 822 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 KRT5P13647 590 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 CD58P19256 250 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 HDXQ7Z353 690 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 C3orf58Q8NDZ4 430 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 APBB2Q92870 758 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 AGPAT1Q99943 283 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 ZSWIM1Q9BR11 485 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 LACRTQ9GZZ8 138 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 ACBD3Q9H3P7 528 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 HMGXB4Q9UGU5 601 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 NAGPAQ9UK23 515 aa15.69■□□□□ 0.1
CXCL12-201ENST00000343575 PCDHB4Q9Y5E5 795 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms