RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 MAP3K6O95382 1288 aa18.09■□□□□ 0.49
GABRB3-202ENST00000311550 ESRRGP62508 458 aa18.09■□□□□ 0.49
GABRB3-202ENST00000311550 SATB1Q01826 763 aa18.09■□□□□ 0.49
GABRB3-202ENST00000311550 DEFB129Q9H1M3 183 aa18.09■□□□□ 0.49
GABRB3-202ENST00000311550 EEF1B2P24534 225 aaKnown RBP18.08■□□□□ 0.49
GABRB3-202ENST00000311550 CENPKQ9BS16 269 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 RANBP17Q9H2T7 1088 aaKnown RBP18.08■□□□□ 0.49
GABRB3-202ENST00000311550 ADA2Q9NZK5 511 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 THEGQ9P2T0 379 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 MAP2K7O14733 419 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 SULT1E1P49888 294 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 OVGP1Q12889 678 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 MIIPQ5JXC2 388 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 FAXCQ5TGI0 409 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 LCA5Q86VQ0 697 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 TRIML2Q8N7C3 387 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 GMCL1P1Q8NEA9 526 aa18.08■□□□□ 0.49
GABRB3-202ENST00000311550 CLGNO14967 610 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 BNIP3LO60238 219 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 PFDN1O60925 122 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 RARGP13631 454 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 TMEM150BA6NC51 233 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 TTC36A6NLP5 189 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 EML1O00423 815 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 MAFGO15525 162 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 CYB5D1Q6P9G0 228 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 ZKSCAN4Q969J2 545 aaPredicted RBP18.08■□□□□ 0.48
GABRB3-202ENST00000311550 FOXP3Q9BZS1 431 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 PIN4Q9Y237 131 aaKnown RBP18.08■□□□□ 0.48
GABRB3-202ENST00000311550 C19orf81C9J6K1 198 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 RFC5P40937 340 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 NSUN2Q08J23 767 aaKnown RBP eCLIP18.08■□□□□ 0.48
GABRB3-202ENST00000311550 FASTKD1Q53R41 847 aaKnown RBP18.08■□□□□ 0.48
GABRB3-202ENST00000311550 ZFPM1Q8IX07 1006 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 LRFN2Q9ULH4 789 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 TRIM33Q9UPN9 1127 aa18.08■□□□□ 0.48
GABRB3-202ENST00000311550 SLITRK3O94933 977 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 CASP5P51878 434 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 CAPRIN2Q6IMN6 1127 aaKnown RBP18.07■□□□□ 0.48
GABRB3-202ENST00000311550 ARHGEF19Q8IW93 802 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 AGGF1Q8N302 714 aaeCLIP18.07■□□□□ 0.48
GABRB3-202ENST00000311550 TMX2Q9Y320 296 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 RNF225M0QZC1 329 aaPredicted RBP18.07■□□□□ 0.48
GABRB3-202ENST00000311550 KRT4P19013 534 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 CTCFP49711 727 aaPredicted RBP18.07■□□□□ 0.48
GABRB3-202ENST00000311550 LRRC36Q1X8D7 754 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 STYK1Q6J9G0 422 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 KIAA1841Q6NSI8 718 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 GSTA4O15217 222 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 GZMAP12544 262 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 PAPOLAP51003 745 aaKnown RBP18.07■□□□□ 0.48
GABRB3-202ENST00000311550 STX3Q13277 289 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 MTMR12Q9C0I1 747 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 TYW5A2RUC4 315 aaKnown RBP18.07■□□□□ 0.48
GABRB3-202ENST00000311550 GTPBP10A4D1E9 387 aaKnown RBP18.07■□□□□ 0.48
GABRB3-202ENST00000311550 DFFAO00273 331 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 CPA2P48052 419 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 RABGAP1LQ5R372 815 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 ALKBH8Q96BT7 664 aaKnown RBP18.07■□□□□ 0.48
GABRB3-202ENST00000311550 TRPV6Q9H1D0 765 aa18.07■□□□□ 0.48
GABRB3-202ENST00000311550 MRPL46Q9H2W6 279 aaKnown RBP18.07■□□□□ 0.48
GABRB3-202ENST00000311550 PTENP60484 403 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 EFCAB12Q6NXP0 572 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 OR6P1Q8NGX9 317 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 TATDN2Q93075 761 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 GPRASP2Q96D09 838 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 SMARCAD1Q9H4L7 1026 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.06■□□□□ 0.48
GABRB3-202ENST00000311550 ABCF3Q9NUQ8 709 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 ARHGEF37A1IGU5 675 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 PJA2O43164 708 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 TARSP26639 723 aaKnown RBP18.06■□□□□ 0.48
GABRB3-202ENST00000311550 ITPRIPL1Q6GPH6 555 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 SV2AQ7L0J3 742 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 NEMP1O14524 444 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 PPP1R12AO14974 1030 aaPredicted RBP18.06■□□□□ 0.48
GABRB3-202ENST00000311550 PPIL6Q8IXY8 311 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 THEM5Q8N1Q8 247 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 PDCD6IPQ8WUM4 868 aaKnown RBP18.06■□□□□ 0.48
GABRB3-202ENST00000311550 SCG3Q8WXD2 468 aaKnown RBP18.06■□□□□ 0.48
GABRB3-202ENST00000311550 RSAD1Q9HA92 442 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 GGA3Q9NZ52 723 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 NOD2Q9HC29 1040 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 ANKRD26Q9UPS8 1709 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 CHEK2O96017 543 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 SLURP2P0DP57 97 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 MYBL2P10244 700 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 SCTRP47872 440 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 GMPSP49915 693 aaPredicted RBP18.06■□□□□ 0.48
GABRB3-202ENST00000311550 SLC12A3P55017 1021 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 HIC1Q14526 733 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 MORF4L2Q15014 288 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 KCTD19Q17RG1 926 aaPredicted RBP18.06■□□□□ 0.48
GABRB3-202ENST00000311550 FGD4Q96M96 766 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 ZNF560Q96MR9 790 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 KIF9Q9HAQ2 790 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 C17orf75Q9HAS0 396 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 DCCP43146 1447 aa18.06■□□□□ 0.48
GABRB3-202ENST00000311550 ASB14A6NK59 587 aa18.05■□□□□ 0.48
GABRB3-202ENST00000311550 ITGB3P05106 788 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms