RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PAIP2Q9BPZ3 127 aaKnown RBP16.03■□□□□ 0.16
CSDC2-201ENST00000306149 USP15Q9Y4E8 981 aaPredicted RBP16.03■□□□□ 0.16
CSDC2-201ENST00000306149 DKC1O60832 514 aaKnown RBP eCLIP16.02■□□□□ 0.16
CSDC2-201ENST00000306149 TCEA3O75764 348 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 CAV1Q03135 178 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 NCOA4Q13772 614 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 FASTKD3Q14CZ7 662 aaKnown RBP16.02■□□□□ 0.16
CSDC2-201ENST00000306149 PLEKHA7Q6IQ23 1121 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 XRRA1Q6P2D8 792 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 MFSD7Q6UXD7 560 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 PNMA8AQ86V59 439 aaPredicted RBP16.02■□□□□ 0.16
CSDC2-201ENST00000306149 MICALL2Q8IY33 904 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 KATNAL2Q8IYT4 538 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 CCDC89Q8N998 374 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 FEZF2Q8TBJ5 459 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 THOC1Q96FV9 657 aaKnown RBP16.02■□□□□ 0.16
CSDC2-201ENST00000306149 NOD2Q9HC29 1040 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 KIAA1586Q9HCI6 787 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 MRPL47Q9HD33 250 aaKnown RBP16.02■□□□□ 0.16
CSDC2-201ENST00000306149 ZNF302Q9NR11 478 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 ZNF148Q9UQR1 794 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 GJA3Q9Y6H8 435 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 IVNS1ABPQ9Y6Y0 642 aa16.02■□□□□ 0.16
CSDC2-201ENST00000306149 LOC102724159A0A0B4J2E5 919 aa16.02■□□□□ 0.15
CSDC2-201ENST00000306149 SPATA31C2B4DYI2 1134 aa16.02■□□□□ 0.15
CSDC2-201ENST00000306149 PSTPIP1O43586 416 aa16.02■□□□□ 0.15
CSDC2-201ENST00000306149 PTPRAP18433 802 aa16.02■□□□□ 0.15
CSDC2-201ENST00000306149 NFX1Q12986 1120 aaKnown RBP16.02■□□□□ 0.15
CSDC2-201ENST00000306149 PRKG1Q13976 671 aa16.02■□□□□ 0.15
CSDC2-201ENST00000306149 PWP2Q15269 919 aaKnown RBP16.02■□□□□ 0.15
CSDC2-201ENST00000306149 TMED2Q15363 201 aa16.02■□□□□ 0.15
CSDC2-201ENST00000306149 TMEM63BQ5T3F8 832 aa16.02■□□□□ 0.15
CSDC2-201ENST00000306149 SAYSD1Q9NPB0 183 aa16.02■□□□□ 0.15
CSDC2-201ENST00000306149 SPAG7O75391 227 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 KLRC2P26717 231 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 MAGEA4P43358 317 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 ZNF668Q96K58 619 aaPredicted RBP16.01■□□□□ 0.15
CSDC2-201ENST00000306149 MCEEQ96PE7 176 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 PORCNQ9H237 461 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 C10orf88Q9H8K7 445 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 BAIAP2L1Q9UHR4 511 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 OATP04181 439 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 CHRM1P11229 460 aaPredicted RBP16.01■□□□□ 0.15
CSDC2-201ENST00000306149 STX2P32856 288 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 OGDHQ02218 1023 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 ZNF252P-AS1Q0IIN9 211 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 PHF13Q86YI8 300 aaPredicted RBP16.01■□□□□ 0.15
CSDC2-201ENST00000306149 TAB3Q8N5C8 712 aaPredicted RBP16.01■□□□□ 0.15
CSDC2-201ENST00000306149 GBP7Q8N8V2 638 aaPredicted RBP16.01■□□□□ 0.15
CSDC2-201ENST00000306149 EXD1Q8NHP7 514 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 TGS1Q96RS0 853 aaKnown RBP16.01■□□□□ 0.15
CSDC2-201ENST00000306149 TCHPQ9BT92 498 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 SAE1Q9UBE0 346 aaPredicted RBP16.01■□□□□ 0.15
CSDC2-201ENST00000306149 PNMA3Q9UL41 463 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 STYXL1Q9Y6J8 313 aa16.01■□□□□ 0.15
CSDC2-201ENST00000306149 CNTNAP2Q9UHC6 1331 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 POC1B-GALNT4F8VUJ3 575 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 SUN1O94901 812 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 KRT1P04264 644 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 POTEJP0CG39 1038 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 ELF1P32519 619 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 MTM1Q13496 603 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 GNPTABQ3T906 1256 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 GALNTL6Q49A17 601 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 FAM47EQ6ZV65 393 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16■□□□□ 0.15
CSDC2-201ENST00000306149 SCYL3Q8IZE3 742 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 CKAP2Q8WWK9 683 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 SLC7A3Q8WY07 619 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 TBC1D31Q96DN5 1066 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 KIF9Q9HAQ2 790 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 PICK1Q9NRD5 415 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 PARVAQ9NVD7 372 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 LGALS13Q9UHV8 139 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 A0A0B4J269 797 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 RASA4BC9J798 803 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 RASA4O43374 803 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 PIAS1O75925 651 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 WEE2P0C1S8 567 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 GMPSP49915 693 aaPredicted RBP16■□□□□ 0.15
CSDC2-201ENST00000306149 ARSEP51690 589 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 NCALDP61601 193 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 KCNJ2P63252 427 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 FAM182AQ5T1J6 154 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 CYP4A22Q5TCH4 519 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 SCARA5Q6ZMJ2 495 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 CAMKK2Q96RR4 588 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 PLCD4Q9BRC7 762 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 DHX33Q9H6R0 707 aaKnown RBP16■□□□□ 0.15
CSDC2-201ENST00000306149 ACAD9Q9H845 621 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 EPB41L3Q9Y2J2 1087 aaPredicted RBP16■□□□□ 0.15
CSDC2-201ENST00000306149 NFASCO94856 1347 aa16■□□□□ 0.15
CSDC2-201ENST00000306149 GOLGA8SH3BPF8 625 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 GOLGA8MH3BSY2 632 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 CDH16O75309 829 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 BANF1O75531 89 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 IFNB1P01574 187 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 PLCB3Q01970 1234 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 GPS1Q13098 491 aa15.99■□□□□ 0.15
CSDC2-201ENST00000306149 EEPD1Q7L9B9 569 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms