RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 GMNCA6NCL1 334 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 M0QYV0 167 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 PRMT3O60678 531 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 CYP2C19P33261 490 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 SLC1A1P43005 524 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 NPY2RP49146 381 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 PEX5P50542 639 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 ARFIP2P53365 341 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 PPP2R2AP63151 447 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 SNRNP48Q6IEG0 339 aaKnown RBP12.61□□□□□ -0.39
PCF11-201ENST00000298281 ZNF544Q6NX49 715 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 FAM47EQ6ZV65 393 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 GLYCTKQ8IVS8 523 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 KCNV2Q8TDN2 545 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 TTC7AQ9ULT0 858 aaPredicted RBP12.61□□□□□ -0.39
PCF11-201ENST00000298281 AKAP10O43572 662 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 TYK2P29597 1187 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 GPS1Q13098 491 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 UGP2Q16851 508 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 PGBD4Q96DM1 585 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 COQ7Q99807 217 aa12.61□□□□□ -0.39
PCF11-201ENST00000298281 GOLGA8TH3BQL2 631 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 SSTR3P32745 418 aaPredicted RBP12.6□□□□□ -0.39
PCF11-201ENST00000298281 MAGEA9P43362 315 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 STX4Q12846 297 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 FAM45BPQ6NSW5 357 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 MMGT1Q8N4V1 131 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 C19orf18Q8NEA5 215 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 PHACTR1Q9C0D0 580 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
PCF11-201ENST00000298281 SLC26A4O43511 780 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 H2AFYO75367 372 aaKnown RBP12.6□□□□□ -0.39
PCF11-201ENST00000298281 PNMA6AP0CW24 399 aaPredicted RBP12.6□□□□□ -0.39
PCF11-201ENST00000298281 FCER1AP12319 257 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 SERPINB1P30740 379 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 HNMTP50135 292 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 CSTF3Q12996 717 aaKnown RBP12.6□□□□□ -0.39
PCF11-201ENST00000298281 HERC5Q9UII4 1024 aaKnown RBP12.6□□□□□ -0.39
PCF11-201ENST00000298281 CAPN15O75808 1086 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 CNTN1Q12860 1018 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 STX3Q13277 289 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 HAUS6Q7Z4H7 955 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 ZHX2Q9Y6X8 837 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 COASYQ13057 564 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 NCF4Q15080 339 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 C11orf70Q9BRQ4 267 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 RNF146Q9NTX7 359 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 SNX6Q9UNH7 406 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 V9GYQ6 96 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 SMIM31A0A1B0GVY4 71 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 ASB14A6NK59 587 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 TAF4O00268 1085 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 ACTR2P61160 394 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 FAM83BQ5T0W9 1011 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 WWP1Q9H0M0 922 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 MFSD1Q9H3U5 465 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 WDR35Q9P2L0 1181 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 RBM7Q9Y580 266 aaKnown RBP12.6□□□□□ -0.39
PCF11-201ENST00000298281 USP6P35125 1406 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 RPS6KA4O75676 772 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 SPIRE2Q8WWL2 714 aa12.6□□□□□ -0.39
PCF11-201ENST00000298281 KDM5CP41229 1560 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 CHURC1-FNTBB4DL54 471 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 ZW10O43264 779 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 DLGAP3O95886 979 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 GPC1P35052 558 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 BEND6Q5SZJ8 279 aaPredicted RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 TSPAN17Q96FV3 270 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 ACAD9Q9H845 621 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 DYTNA2CJ06 578 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 SFI1A8K8P3 1242 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 MMP10P09238 476 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 TNNI3P19429 210 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 BTKQ06187 659 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 STKLD1Q8NE28 680 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 WDR36Q8NI36 951 aaKnown RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 TMEM47Q9BQJ4 181 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 FBXL21Q9UKT6 434 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 PALLDQ8WX93 1383 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 PSMD14O00487 310 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 PGK2P07205 417 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 LTKP29376 864 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 STAT4Q14765 748 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 FRMD5Q7Z6J6 570 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 SHCBP1Q8NEM2 672 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 DDI1Q8WTU0 396 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 RFFLQ8WZ73 363 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 STAMBPL1Q96FJ0 436 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 PLEKHA8P1O95397 391 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 NOS3P29474 1203 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 ALDH1A3P47895 512 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 FAM102AQ5T9C2 384 aaPredicted RBP12.59□□□□□ -0.39
PCF11-201ENST00000298281 DDI2Q5TDH0 399 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 PRUNE1Q86TP1 453 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 TNIP2Q8NFZ5 429 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 CALML6Q8TD86 181 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 WRNIP1Q96S55 665 aa12.59□□□□□ -0.39
PCF11-201ENST00000298281 HEMGNQ9BXL5 484 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms