RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 EML3Q32P44 896 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 TTC33Q6PID6 262 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 SLC7A14Q8TBB6 771 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 SPATA18Q8TC71 538 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 PLEKHA8Q96JA3 519 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 MKNK1Q9BUB5 465 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 RPAP3Q9H6T3 665 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 TBC1D22BQ9NU19 505 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 HERC5Q9UII4 1024 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 ABCC2Q92887 1545 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 PRR23AA6NEV1 266 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 MZF1P28698 734 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 ZRANB3Q5FWF4 1079 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 DYRK4Q9NR20 520 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 IRAK1P51617 712 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 STK4Q13043 487 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 PRAMEF18Q5VWM3 479 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 OTUB1Q96FW1 271 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 COA1Q9GZY4 146 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 IGSF1Q8N6C5 1336 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 STK36Q9NRP7 1315 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 CCT8L1PA6NM43 557 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 H7C1W4 665 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 UCHL3P15374 230 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 SKIV2LQ15477 1246 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 PNKPQ96T60 521 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 SEPT5Q99719 369 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 DUSP10Q9Y6W6 482 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 TCF3P15923 654 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 GTF2H3Q13889 308 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 CATSPER1Q8NEC5 780 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 FLAD1Q8NFF5 587 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 CYP4F12Q9HCS2 524 aa17.56■□□□□ 0.4
TSPAN3-201ENST00000267970 PYGMP11217 842 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 FRMD5Q7Z6J6 570 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 AGGF1Q8N302 714 aaeCLIP17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 GLMNQ92990 594 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 CD209Q9NNX6 404 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 SELENONQ9NZV5 590 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 MYMKA6NI61 221 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 OTOAQ7RTW8 1153 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 GUF1Q8N442 669 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 ZSWIM2Q8NEG5 633 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 ARHGEF26Q96DR7 871 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 ERLEC1Q96DZ1 483 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 OTUD4Q01804 1114 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 GRIN1Q05586 938 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 CYLC2Q14093 348 aaPredicted RBP17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 TRIM16LQ309B1 348 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 ARID3BQ8IVW6 561 aaPredicted RBP17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 RBBP8NLQ8NC74 664 aaPredicted RBP17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 FAM20AQ96MK3 541 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 DTNAQ9Y4J8 743 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 METP08581 1390 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 ZNF197O14709 1029 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 KRT76Q01546 638 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 LRRC8BQ6P9F7 803 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 DNMT1P26358 1616 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 CHRM3P20309 590 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 CDC25CP30307 473 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 GSSP48637 474 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 HSD17B4P51659 736 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 ARAP3Q8WWN8 1544 aa17.55■□□□□ 0.4
TSPAN3-201ENST00000267970 AP3B1O00203 1094 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 ENDOD1O94919 500 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 GGPS1O95749 300 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 DDX39BQ13838 428 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 DNAL1Q4LDG9 190 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 DCAF6Q58WW2 860 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 TTC39BQ5VTQ0 682 aaPredicted RBP17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 ANKS3Q6ZW76 656 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 LRRC71Q8N4P6 559 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 CASKIN2Q8WXE0 1202 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 NSL1Q96IY1 281 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 SOX13Q9UN79 622 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 MT-CO1P00395 513 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 FMO5P49326 533 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 DPYDQ12882 1025 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 DENND5BQ6ZUT9 1274 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 TRIM69Q86WT6 500 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 KCTD10Q9H3F6 313 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 KLHL18O94889 574 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 HIST1H2AGP0C0S8 130 aaPredicted RBP17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 HIST1H2ADP20671 130 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 NCOA4Q13772 614 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 AKIRIN2Q53H80 203 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 TC2NQ8N9U0 490 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 L3MBTL3Q96JM7 780 aaPredicted RBP17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 HIST1H2AHQ96KK5 128 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 HIST1H2AJQ99878 128 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 H2AFJQ9BTM1 129 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 CCDC134Q9H6E4 229 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 CNGB3Q9NQW8 809 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 RALAP11233 206 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 TTLL4Q14679 1199 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 CHMP1BQ7LBR1 199 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 FGD2Q7Z6J4 655 aa17.54■□□□□ 0.4
TSPAN3-201ENST00000267970 JADE3Q92613 823 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms