RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Col9a2Q07643 688 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Fbln1Q08879 705 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 PighQ5M9N4 188 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Hoxa13Q62424 386 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Sh3bgrl2Q8BG73 107 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 TiprlQ8BH58 271 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Oscp1Q8BHW2 379 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 FsbpQ8BKE5 299 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rapgef5Q8C0Q9 814 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Frs2Q8C180 508 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cabs1Q8C633 391 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Lsm14bQ8CGC4 385 aaKnown RBP6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Epn2Q8CHU3 595 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Nudt13Q8JZU0 352 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Arhgap18Q8K0Q5 663 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Enox2Q8R0Z2 598 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Nrbp2Q91V36 499 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Adcy4Q91WF3 1077 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ssu72Q9CY97 194 aaKnown RBP6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tbc1d20Q9D9I4 402 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 IkQ9Z1M8 557 aaKnown RBP6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Scn10aQ6QIY3 1958 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 SktA2AQ25 1946 aaKnown RBP6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tex13aA2AFS9 377 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gm8994E9PV04 411 aaKnown RBP6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cdk14O35495 469 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Alkbh1P0CB42 389 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ercc5P35689 1170 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Pon1P52430 355 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Aqp8P56404 261 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Agbl1Q09M05 972 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Lmntd2Q0VET5 664 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 TchpQ3TVW5 497 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rcsd1Q3UZA1 412 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ccdc92bQ5SUE3 299 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Atp13a4Q5XF90 1193 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Six1Q62231 284 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cep104Q80V31 926 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Znf579Q80VM4 562 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Calhm6Q8C9E8 313 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Actl9Q8CG27 415 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Scrn2Q8VCA8 425 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Utp6Q8VCY6 597 aaKnown RBP6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 St13Q99L47 371 aaKnown RBP6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Vta1Q9CR26 309 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Pard3bQ9CSB4 1203 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Galnt15Q9D2N8 638 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 PlgrktQ9D3P8 147 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rsrc1Q9DBU6 334 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cyth1Q9QX11 398 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 1700016G14RikA0A286YCZ6 238 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 TazI7HJS2 263 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cyth3O08967 399 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Drg1P32233 367 aaKnown RBP6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ap1m1P35585 423 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 PtpreP49446 699 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Bace1P56818 501 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ppp3caP63328 521 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ccdc127Q3TC33 260 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gm1604bQ3TRG0 118 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ece1Q4PZA2 769 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 ItgaeQ60677 1167 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rgl1Q60695 768 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Syn2Q64332 586 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gja3Q64448 417 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tspyl5Q69ZB3 406 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 MregQ6NVG5 214 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Snx19Q6P4T1 997 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ntrk3Q6VNS1 825 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Lsm8Q6ZWM4 96 aaKnown RBP6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 LdhdQ7TNG8 484 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cplx4Q80WM3 160 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Zbtb46Q8BID6 600 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Slc35b4Q8CIA5 331 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Col23a1Q8K4G2 532 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ccdc65Q8VHI7 493 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Caskin2Q8VHK1 1201 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Snf8Q9CZ28 258 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rtn3Q9ES97 964 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cdc42ep4Q9JM96 349 aaKnown RBP6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tk2Q9R088 270 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Adam22Q9R1V6 904 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Trip11E9Q512 1976 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 IqccA2ADZ8 418 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Mageb2A2AHM0 380 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rfx8D3YU81 596 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Zfp212G3X8R7 492 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 4933406M09RikG3XA12 479 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Sema4dO09126 861 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tnfrsf11aO35305 625 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Stt3aP46978 705 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 SbdsP70122 250 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Irf3P70671 419 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ly9Q01965 654 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Mapre1Q61166 268 aaKnown RBP6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tfe3Q64092 572 aaKnown RBP6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Myo6Q64331 1265 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Kcnk18Q6VV64 394 aa6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Smndc1Q8BGT7 238 aaKnown RBP6.61□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tmco6Q8BQX5 494 aa6.61□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 340.3 ms