Protein–RNA interactions for Protein: Q9JM96

Cdc42ep4, Cdc42 effector protein 4, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep4Q9JM96 Gm25239-201ENSMUST00000174915 86 ntBASIC42.04■■■■■ 4.32
Cdc42ep4Q9JM96 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
Cdc42ep4Q9JM96 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
Cdc42ep4Q9JM96 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Cdc42ep4Q9JM96 Gm24109-201ENSMUST00000175489 103 ntBASIC36.66■■■■□ 3.46
Cdc42ep4Q9JM96 Gm15042-201ENSMUST00000120212 883 ntBASIC36.29■■■■□ 3.4
Cdc42ep4Q9JM96 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Cdc42ep4Q9JM96 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.56■■■■□ 3.28
Cdc42ep4Q9JM96 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
Cdc42ep4Q9JM96 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Cdc42ep4Q9JM96 Gm15045-201ENSMUST00000117359 883 ntBASIC35.41■■■■□ 3.26
Cdc42ep4Q9JM96 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Cdc42ep4Q9JM96 Gm23366-201ENSMUST00000175022 89 ntBASIC35.03■■■■□ 3.2
Cdc42ep4Q9JM96 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Cdc42ep4Q9JM96 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.35■■■■□ 3.09
Cdc42ep4Q9JM96 Psd-208ENSMUST00000224556 2034 ntBASIC34.34■■■■□ 3.09
Cdc42ep4Q9JM96 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Cdc42ep4Q9JM96 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.03■■■■□ 3.04
Cdc42ep4Q9JM96 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.02■■■■□ 3.04
Cdc42ep4Q9JM96 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Cdc42ep4Q9JM96 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Cdc42ep4Q9JM96 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Cdc42ep4Q9JM96 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
Cdc42ep4Q9JM96 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.57■■■□□ 2.96
Cdc42ep4Q9JM96 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Cdc42ep4Q9JM96 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.38■■■□□ 2.93
Cdc42ep4Q9JM96 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.35■■■□□ 2.93
Cdc42ep4Q9JM96 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Cdc42ep4Q9JM96 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Cdc42ep4Q9JM96 Gm25238-201ENSMUST00000174914 89 ntBASIC33.32■■■□□ 2.92
Cdc42ep4Q9JM96 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Cdc42ep4Q9JM96 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Cdc42ep4Q9JM96 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Cdc42ep4Q9JM96 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Cdc42ep4Q9JM96 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Cdc42ep4Q9JM96 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Cdc42ep4Q9JM96 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
Cdc42ep4Q9JM96 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Cdc42ep4Q9JM96 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Cdc42ep4Q9JM96 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.63■■■□□ 2.81
Cdc42ep4Q9JM96 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
Cdc42ep4Q9JM96 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Cdc42ep4Q9JM96 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Cdc42ep4Q9JM96 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.43■■■□□ 2.78
Cdc42ep4Q9JM96 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
Cdc42ep4Q9JM96 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Cdc42ep4Q9JM96 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Cdc42ep4Q9JM96 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.19■■■□□ 2.74
Cdc42ep4Q9JM96 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.17■■■□□ 2.74
Cdc42ep4Q9JM96 Gm25262-201ENSMUST00000174934 133 ntBASIC32.14■■■□□ 2.74
Cdc42ep4Q9JM96 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.12■■■□□ 2.73
Cdc42ep4Q9JM96 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Cdc42ep4Q9JM96 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cdc42ep4Q9JM96 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cdc42ep4Q9JM96 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Cdc42ep4Q9JM96 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cdc42ep4Q9JM96 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.85■■■□□ 2.69
Cdc42ep4Q9JM96 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Cdc42ep4Q9JM96 Gm27325-201ENSMUST00000175467 74 ntBASIC31.7■■■□□ 2.67
Cdc42ep4Q9JM96 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.67■■■□□ 2.66
Cdc42ep4Q9JM96 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.62■■■□□ 2.65
Cdc42ep4Q9JM96 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Cdc42ep4Q9JM96 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Cdc42ep4Q9JM96 Gm26115-201ENSMUST00000175605 87 ntBASIC31.52■■■□□ 2.64
Cdc42ep4Q9JM96 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.5■■■□□ 2.63
Cdc42ep4Q9JM96 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.49■■■□□ 2.63
Cdc42ep4Q9JM96 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Cdc42ep4Q9JM96 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.47■■■□□ 2.63
Cdc42ep4Q9JM96 Rab21-202ENSMUST00000218831 843 ntBASIC31.43■■■□□ 2.62
Cdc42ep4Q9JM96 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.41■■■□□ 2.62
Cdc42ep4Q9JM96 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cdc42ep4Q9JM96 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.33■■■□□ 2.61
Cdc42ep4Q9JM96 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Cdc42ep4Q9JM96 Gm8109-201ENSMUST00000194076 746 ntBASIC31.31■■■□□ 2.6
Cdc42ep4Q9JM96 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Cdc42ep4Q9JM96 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cdc42ep4Q9JM96 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Cdc42ep4Q9JM96 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Cdc42ep4Q9JM96 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Cdc42ep4Q9JM96 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cdc42ep4Q9JM96 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cdc42ep4Q9JM96 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Cdc42ep4Q9JM96 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.04■■■□□ 2.56
Cdc42ep4Q9JM96 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cdc42ep4Q9JM96 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31■■■□□ 2.55
Cdc42ep4Q9JM96 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.93■■■□□ 2.54
Cdc42ep4Q9JM96 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.83■■■□□ 2.53
Cdc42ep4Q9JM96 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Cdc42ep4Q9JM96 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Cdc42ep4Q9JM96 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Cdc42ep4Q9JM96 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.76■■■□□ 2.52
Cdc42ep4Q9JM96 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cdc42ep4Q9JM96 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cdc42ep4Q9JM96 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.67■■■□□ 2.5
Cdc42ep4Q9JM96 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cdc42ep4Q9JM96 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cdc42ep4Q9JM96 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.6■■■□□ 2.49
Cdc42ep4Q9JM96 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cdc42ep4Q9JM96 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.57■■■□□ 2.48
Cdc42ep4Q9JM96 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms