Protein–RNA interactions for Protein: Q6VNS1

Ntrk3, NT-3 growth factor receptor, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ntrk3Q6VNS1 Gm25239-201ENSMUST00000174915 86 ntBASIC36.93■■■■□ 3.5
Ntrk3Q6VNS1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Ntrk3Q6VNS1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
Ntrk3Q6VNS1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.85■■■■□ 3.17
Ntrk3Q6VNS1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
Ntrk3Q6VNS1 Psd-208ENSMUST00000224556 2034 ntBASIC33.71■■■□□ 2.99
Ntrk3Q6VNS1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Ntrk3Q6VNS1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Ntrk3Q6VNS1 Gm15042-201ENSMUST00000120212 883 ntBASIC33.05■■■□□ 2.88
Ntrk3Q6VNS1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ntrk3Q6VNS1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Ntrk3Q6VNS1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Ntrk3Q6VNS1 Gm15045-201ENSMUST00000117359 883 ntBASIC32.5■■■□□ 2.79
Ntrk3Q6VNS1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.45■■■□□ 2.78
Ntrk3Q6VNS1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ntrk3Q6VNS1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ntrk3Q6VNS1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ntrk3Q6VNS1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ntrk3Q6VNS1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ntrk3Q6VNS1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ntrk3Q6VNS1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Ntrk3Q6VNS1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ntrk3Q6VNS1 Gm24109-201ENSMUST00000175489 103 ntBASIC31.67■■■□□ 2.66
Ntrk3Q6VNS1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ntrk3Q6VNS1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ntrk3Q6VNS1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ntrk3Q6VNS1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
Ntrk3Q6VNS1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.51■■■□□ 2.64
Ntrk3Q6VNS1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ntrk3Q6VNS1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ntrk3Q6VNS1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.27■■■□□ 2.6
Ntrk3Q6VNS1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ntrk3Q6VNS1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ntrk3Q6VNS1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ntrk3Q6VNS1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ntrk3Q6VNS1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ntrk3Q6VNS1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
Ntrk3Q6VNS1 Gm23366-201ENSMUST00000175022 89 ntBASIC30.93■■■□□ 2.54
Ntrk3Q6VNS1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.89■■■□□ 2.53
Ntrk3Q6VNS1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Ntrk3Q6VNS1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ntrk3Q6VNS1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ntrk3Q6VNS1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.71■■■□□ 2.51
Ntrk3Q6VNS1 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.67■■■□□ 2.5
Ntrk3Q6VNS1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ntrk3Q6VNS1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Ntrk3Q6VNS1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ntrk3Q6VNS1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ntrk3Q6VNS1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.38■■■□□ 2.45
Ntrk3Q6VNS1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Ntrk3Q6VNS1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ntrk3Q6VNS1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.17■■■□□ 2.42
Ntrk3Q6VNS1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ntrk3Q6VNS1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ntrk3Q6VNS1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ntrk3Q6VNS1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ntrk3Q6VNS1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.9■■■□□ 2.38
Ntrk3Q6VNS1 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.83■■■□□ 2.37
Ntrk3Q6VNS1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Ntrk3Q6VNS1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Ntrk3Q6VNS1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ntrk3Q6VNS1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Ntrk3Q6VNS1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ntrk3Q6VNS1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Ntrk3Q6VNS1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Ntrk3Q6VNS1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Ntrk3Q6VNS1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Ntrk3Q6VNS1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.33
Ntrk3Q6VNS1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Ntrk3Q6VNS1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Ntrk3Q6VNS1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
Ntrk3Q6VNS1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ntrk3Q6VNS1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ntrk3Q6VNS1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ntrk3Q6VNS1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Ntrk3Q6VNS1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.26■■■□□ 2.27
Ntrk3Q6VNS1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ntrk3Q6VNS1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.21■■■□□ 2.27
Ntrk3Q6VNS1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ntrk3Q6VNS1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ntrk3Q6VNS1 Gm27325-201ENSMUST00000175467 74 ntBASIC29.13■■■□□ 2.25
Ntrk3Q6VNS1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ntrk3Q6VNS1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ntrk3Q6VNS1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ntrk3Q6VNS1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ntrk3Q6VNS1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ntrk3Q6VNS1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ntrk3Q6VNS1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Ntrk3Q6VNS1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Ntrk3Q6VNS1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ntrk3Q6VNS1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Ntrk3Q6VNS1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ntrk3Q6VNS1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
Ntrk3Q6VNS1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ntrk3Q6VNS1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ntrk3Q6VNS1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ntrk3Q6VNS1 Gm25238-201ENSMUST00000174914 89 ntBASIC28.92■■■□□ 2.22
Ntrk3Q6VNS1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.78■■■□□ 2.2
Ntrk3Q6VNS1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ntrk3Q6VNS1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms