RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Cdpf1Q8R3A2 119 aa12.48□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Zdhhc5Q8VDZ4 715 aa12.48□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Camk2gQ923T9 529 aa12.48□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Rnf144aQ925F3 292 aa12.48□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Phospho2Q9D9M5 241 aa12.48□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Dnajb7Q9QYI8 312 aa12.48□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Col5a1O88207 1838 aa12.48□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Ranbp2Q9ERU9 3053 aaKnown RBP12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 JcadQ5DTX6 1320 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Casp14O89094 257 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Gas2P11862 314 aaKnown RBP12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Rab6aP35279 208 aaKnown RBP12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Cyp2c65Q148B1 490 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 TceancQ3US16 359 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Lrrfip1Q3UZ39 729 aaKnown RBP12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Tab3Q571K4 716 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Slc4a10Q5DTL9 1118 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Trav8d-2Q5R1B6 112 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 NotoQ5TIS6 240 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 BC048507Q80ZS7 89 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Nt5dc1Q8C5P5 467 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Mamdc2Q8CG85 686 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Mtmr4Q91XS1 1190 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Filip1Q9CS72 1211 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 BccipQ9CWI3 316 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Pold4Q9CWP8 107 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 D930007J09RikQ9D2K6 131 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Rgs3Q9DC04 966 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Pold3Q9EQ28 462 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Stk39Q9Z1W9 556 aa12.47□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Abca12E9Q876 2595 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Nt5c1aA3KFX0 365 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Gm8909G3UXE9 396 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Vwa3bJ9JI28 736 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Tspan6O70401 245 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Zfp1P08042 402 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Cyp2f2P33267 491 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Cd86P42082 309 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Nfe2Q07279 373 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Sim1Q61045 765 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Kiaa1841Q68FF0 718 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Vps52Q8C754 723 aaKnown RBP12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 C1sbQ8CFG8 688 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 C1saQ8CG14 688 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Coq9Q8K1Z0 313 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Masp2Q91WP0 685 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Slco6d1Q9D5W6 683 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Spatc1lQ9D9W0 342 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Mlh1Q9JK91 760 aa12.46□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Cep250Q60952 2414 aa12.46□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Zfc3h1B2RT41 1992 aaKnown RBP12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Usp9yF8VPU6 2556 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Lama5Q61001 3718 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Golga4Q91VW5 2238 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Gm15080A2BI02 449 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 NudcO35685 332 aaKnown RBP12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Cd163Q2VLH6 1121 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Togaram2Q3TYG6 1002 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Zfp36l3Q5ISE2 725 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Ahcyl2Q68FL4 613 aaKnown RBP12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Edrf1Q6GQV7 1239 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 PogkQ80TC5 607 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Tmem30bQ8BHG3 353 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Znf473Q8BI67 892 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Spice1Q8C804 860 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Acvr1cQ8K348 493 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Fam110aQ8R184 296 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Pcdhb12Q91Y07 789 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Nop2Q922K7 793 aaKnown RBP12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Rab27aQ9ERI2 221 aa12.45□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Ash1lQ99MY8 2958 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Samd1D3YXK1 519 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Plekha5E9Q6H8 1269 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Hsd3b6O35469 373 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 InhbcP55104 352 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Drd2P61168 444 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 ItkQ03526 625 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 SPINDOCQ05AH6 381 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Sppl2bQ3TD49 578 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Kcnh1Q60603 989 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Rrp12Q6P5B0 1295 aaKnown RBP12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Smarca1Q6PGB8 1046 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Cspg5Q71M36 566 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Ccdc71Q8VEG0 433 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 1700129C05RikQ9CQ77 218 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Akap8Q9DBR0 687 aaKnown RBP12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Tlr6Q9EPW9 795 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Mgea5Q9EQQ9 916 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Mmel1Q9JLI3 765 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Hacl1Q9QXE0 581 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Il17bQ9QXT6 180 aa12.44□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Celsr1O35161 3034 aa12.43□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Anapc15-psA0A140T8L6 141 aa12.43□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Gm7086A0A1W2P766 342 aa12.43□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Ano3A2AHL1 981 aa12.43□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Mtco1P00397 514 aa12.43□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 PparaP23204 468 aa12.43□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 EdnrbP48302 442 aa12.43□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Uba1Q02053 1058 aaKnown RBP12.43□□□□□ -0.42
Hmgb1-202ENSMUST00000093196 Sap30bpQ02614 308 aa12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 59.9 ms