RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W FMP48P53233 369 aa3.84□□□□□ -1.79
SSO1YPL232W MRPL22P53881 309 aa3.84□□□□□ -1.79
SSO1YPL232W CTF19Q02732 369 aa3.84□□□□□ -1.79
SSO1YPL232W HNT1Q04344 158 aaKnown RBP3.84□□□□□ -1.79
SSO1YPL232W SOG2Q08817 791 aa3.84□□□□□ -1.79
SSO1YPL232W YPR013CQ12145 317 aa3.84□□□□□ -1.79
SSO1YPL232W SAL1D6W196 494 aa3.83□□□□□ -1.8
SSO1YPL232W CDC23P16522 626 aa3.83□□□□□ -1.8
SSO1YPL232W IFM1P25038 676 aa3.83□□□□□ -1.8
SSO1YPL232W AHC2P25649 128 aa3.83□□□□□ -1.8
SSO1YPL232W YUH1P35127 236 aa3.83□□□□□ -1.8
SSO1YPL232W IMD2P38697 523 aaKnown RBP3.83□□□□□ -1.8
SSO1YPL232W FCY21P40039 528 aa3.83□□□□□ -1.8
SSO1YPL232W GPI14P47088 403 aaKnown RBP3.83□□□□□ -1.8
SSO1YPL232W SLX9P53251 210 aaPredicted RBP3.83□□□□□ -1.8
SSO1YPL232W NCE103P53615 221 aa3.83□□□□□ -1.8
SSO1YPL232W ERV25P54837 211 aaKnown RBP3.83□□□□□ -1.8
SSO1YPL232W YGK3Q12222 375 aaPredicted RBP3.83□□□□□ -1.8
SSO1YPL232W BOL1Q3E793 110 aa3.83□□□□□ -1.8
SSO1YPL232W YLR099W-AQ3E798 87 aa3.83□□□□□ -1.8
SSO1YPL232W YPR108W-AQ3E7B3 70 aa3.83□□□□□ -1.8
SSO1YPL232W PET54P10834 293 aa3.82□□□□□ -1.8
SSO1YPL232W MDH1P17505 334 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SSO1YPL232W YBR137WP38276 179 aa3.82□□□□□ -1.8
SSO1YPL232W YLF2P38746 405 aa3.82□□□□□ -1.8
SSO1YPL232W TDA4P47153 279 aa3.82□□□□□ -1.8
SSO1YPL232W RRG8Q06109 277 aa3.82□□□□□ -1.8
SSO1YPL232W ATG39Q06159 398 aa3.82□□□□□ -1.8
SSO1YPL232W YJR112W-AQ3E743 109 aa3.82□□□□□ -1.8
SSO1YPL232W YLR365WQ7LIF2 110 aa3.82□□□□□ -1.8
SSO1YPL232W URA3P03962 267 aa3.81□□□□□ -1.8
SSO1YPL232W PMR1P13586 950 aa3.81□□□□□ -1.8
SSO1YPL232W FAR1P21268 830 aa3.81□□□□□ -1.8
SSO1YPL232W GDT1P38301 280 aaPredicted RBP3.81□□□□□ -1.8
SSO1YPL232W MED8P38304 223 aa3.81□□□□□ -1.8
SSO1YPL232W NVJ1P38881 321 aa3.81□□□□□ -1.8
SSO1YPL232W SMB1P40018 196 aaKnown RBP3.81□□□□□ -1.8
SSO1YPL232W SIM1P40472 476 aa3.81□□□□□ -1.8
SSO1YPL232W LST8P41318 303 aa3.81□□□□□ -1.8
SSO1YPL232W SYS1P41544 203 aa3.81□□□□□ -1.8
SSO1YPL232W MIC26P50087 233 aa3.81□□□□□ -1.8
SSO1YPL232W DOC1P53068 250 aa3.81□□□□□ -1.8
SSO1YPL232W TSA2Q04120 196 aa3.81□□□□□ -1.8
SSO1YPL232W VPS63O13549 108 aa3.8□□□□□ -1.8
SSO1YPL232W PUP1P25043 261 aa3.8□□□□□ -1.8
SSO1YPL232W FMP33P46998 180 aa3.8□□□□□ -1.8
SSO1YPL232W ERV29P53337 310 aa3.8□□□□□ -1.8
SSO1YPL232W FYV6P53913 173 aa3.8□□□□□ -1.8
SSO1YPL232W TLG1Q03322 224 aa3.8□□□□□ -1.8
SSO1YPL232W SOD1P00445 154 aaKnown RBP3.79□□□□□ -1.8
SSO1YPL232W CDC31P06704 161 aaKnown RBP3.79□□□□□ -1.8
SSO1YPL232W NOP1P15646 327 aaKnown RBP3.79□□□□□ -1.8
SSO1YPL232W AST1P35183 429 aa3.79□□□□□ -1.8
SSO1YPL232W ATP3P38077 311 aaKnown RBP3.79□□□□□ -1.8
SSO1YPL232W YPT31P38555 223 aaKnown RBP3.79□□□□□ -1.8
SSO1YPL232W YHR138CP38841 114 aaPredicted RBP3.79□□□□□ -1.8
SSO1YPL232W EGD2P38879 174 aaKnown RBP3.79□□□□□ -1.8
SSO1YPL232W CIN4P39110 191 aa3.79□□□□□ -1.8
SSO1YPL232W BOL3P39724 118 aa3.79□□□□□ -1.8
SSO1YPL232W AIM20P40451 204 aa3.79□□□□□ -1.8
SSO1YPL232W CAF16P43569 289 aa3.79□□□□□ -1.8
SSO1YPL232W BNA6P43619 295 aa3.79□□□□□ -1.8
SSO1YPL232W ERP6P53198 216 aa3.79□□□□□ -1.8
SSO1YPL232W SWT21P53873 357 aaPredicted RBP3.79□□□□□ -1.8
SSO1YPL232W FMP42Q04991 504 aa3.79□□□□□ -1.8
SSO1YPL232W HBN1Q96VH4 193 aa3.79□□□□□ -1.8
SSO1YPL232W GCN4P03069 281 aa3.78□□□□□ -1.8
SSO1YPL232W CHO1P08456 276 aa3.78□□□□□ -1.8
SSO1YPL232W PRE9P23638 258 aaKnown RBP3.78□□□□□ -1.8
SSO1YPL232W SHE2P36068 246 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
SSO1YPL232W YBR184WP38299 523 aa3.78□□□□□ -1.8
SSO1YPL232W SSZ1P38788 538 aaKnown RBP3.78□□□□□ -1.8
SSO1YPL232W MST28P39552 234 aa3.78□□□□□ -1.8
SSO1YPL232W YAR068WP39564 161 aa3.78□□□□□ -1.8
SSO1YPL232W YJR011CP47086 261 aaPredicted RBP3.78□□□□□ -1.8
SSO1YPL232W MST27P53176 234 aa3.78□□□□□ -1.8
SSO1YPL232W HAL1Q01766 294 aa3.78□□□□□ -1.8
SSO1YPL232W RXT3Q07458 294 aa3.78□□□□□ -1.8
SSO1YPL232W YFH1Q07540 174 aa3.78□□□□□ -1.8
SSO1YPL232W HRD1Q08109 551 aa3.78□□□□□ -1.8
SSO1YPL232W YNG1Q08465 219 aa3.78□□□□□ -1.8
SSO1YPL232W YOR352WQ08816 343 aa3.78□□□□□ -1.8
SSO1YPL232W RAD28Q12021 506 aa3.78□□□□□ -1.8
SSO1YPL232W TIR4Q12218 487 aaPredicted RBP3.78□□□□□ -1.8
SSO1YPL232W TRM10Q12400 293 aa3.78□□□□□ -1.8
SSO1YPL232W ODC2Q99297 307 aa3.78□□□□□ -1.8
SSO1YPL232W YEL009C-AA0A023PZF2 135 aa3.77□□□□□ -1.81
SSO1YPL232W CYC3P06182 269 aa3.77□□□□□ -1.81
SSO1YPL232W URA6P15700 204 aa3.77□□□□□ -1.81
SSO1YPL232W SEN2P16658 377 aa3.77□□□□□ -1.81
SSO1YPL232W ERS1P17261 260 aa3.77□□□□□ -1.81
SSO1YPL232W YIL060WP40519 144 aa3.77□□□□□ -1.81
SSO1YPL232W RPR2P40571 144 aa3.77□□□□□ -1.81
SSO1YPL232W AGC1Q12482 902 aa3.77□□□□□ -1.81
SSO1YPL232W HUG1Q6Q5K6 68 aa3.77□□□□□ -1.81
SSO1YPL232W UPS2P35200 230 aa3.76□□□□□ -1.81
SSO1YPL232W PHD1P36093 366 aa3.76□□□□□ -1.81
SSO1YPL232W FMP23P38231 175 aa3.76□□□□□ -1.81
SSO1YPL232W DOG2P38773 246 aa3.76□□□□□ -1.81
SSO1YPL232W DOG1P38774 246 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms