RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	MBF1	O14467	151 aa	Known RBP	1.1	□□□□□ -2.23
RLM1	YPL089C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	1.1	□□□□□ -2.23	not detected
RLM1	YPL089C	YCR090C	P25654	182 aa	Known RBP	1.1	□□□□□ -2.23
RLM1	YPL089C	UTR5	P32630	166 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	VPS51	P36116	164 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	YKR041W	P36134	250 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	YHR180W	P38868	163 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	SRP14	P38985	146 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	ICE2	P40499	491 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	ARP3	P47117	449 aa	Known RBP	1.1	□□□□□ -2.23
RLM1	YPL089C	SMD2	Q06217	110 aa	Known RBP	1.1	□□□□□ -2.23
RLM1	YPL089C	TSC3	Q3E790	80 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	CMC2	Q3E7A4	109 aa		1.1	□□□□□ -2.23
RLM1	YPL089C	YDL085C-A	Q3E7B7	68 aa	Known RBP	1.1	□□□□□ -2.23
RLM1	YPL089C	PET9	P18239	318 aa	Known RBP	1.09	□□□□□ -2.24
RLM1	YPL089C	CKS1	P20486	150 aa	Known RBP	1.09	□□□□□ -2.24
RLM1	YPL089C	ATP15	P21306	62 aa		1.09	□□□□□ -2.24
RLM1	YPL089C	MRPS28	P21771	286 aa		1.09	□□□□□ -2.24
RLM1	YPL089C	MEI4	P29467	408 aa		1.09	□□□□□ -2.24
RLM1	YPL089C	TRR1	P29509	319 aa	Known RBP	1.09	□□□□□ -2.24
RLM1	YPL089C	ARC19	P33204	171 aa	Known RBP	1.09	□□□□□ -2.24
RLM1	YPL089C	PGD1	P40356	397 aa		1.09	□□□□□ -2.24
RLM1	YPL089C	GVP36	P40531	326 aa	Known RBP	1.09	□□□□□ -2.24
RLM1	YPL089C	CIS3	P47001	227 aa		1.09	□□□□□ -2.24
RLM1	YPL089C	YNR062C	P53748	327 aa		1.09	□□□□□ -2.24
RLM1	YPL089C	YDR274C	P87283	123 aa		1.09	□□□□□ -2.24
RLM1	YPL089C	MRPS8	Q03799	155 aa		1.09	□□□□□ -2.24
RLM1	YPL089C	HNT1	Q04344	158 aa	Known RBP	1.09	□□□□□ -2.24
RLM1	YPL089C	EMC6	Q12431	108 aa		1.09	□□□□□ -2.24
RLM1	YPL089C	FKS1	P38631	1876 aa	Known RBP	1.09	□□□□□ -2.24
RLM1	YPL089C	SNF4	P12904	322 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	1.08	□□□□□ -2.24	not detected
RLM1	YPL089C	YOR062C	P36025	268 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	ARO8	P53090	500 aa	Known RBP	1.08	□□□□□ -2.24
RLM1	YPL089C	YNL140C	P53910	189 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	YLR460C	P54007	376 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	DGA1	Q08650	418 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	RPS24A	P0CX31	135 aa	Known RBP	1.08	□□□□□ -2.24
RLM1	YPL089C	RPS24B	P0CX32	135 aa	Known RBP	1.08	□□□□□ -2.24
RLM1	YPL089C	AHC2	P25649	128 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	MGT1	P26188	188 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	CLG1	P35190	452 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	UMP1	P38293	148 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	ERV15	P38312	142 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	YER121W	P40076	114 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	FMP32	P43557	207 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	YJR111C	P47148	283 aa	Known RBP	1.08	□□□□□ -2.24
RLM1	YPL089C	JAC1	P53193	184 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	YNL247W	P53852	767 aa	Known RBP	1.08	□□□□□ -2.24
RLM1	YPL089C	YMR315W	Q04869	349 aa	Known RBP	1.08	□□□□□ -2.24
RLM1	YPL089C	YLR031W	Q07978	186 aa		1.08	□□□□□ -2.24
RLM1	YPL089C	BRX1	Q08235	291 aa	Known RBP	1.08	□□□□□ -2.24
RLM1	YPL089C	SCL1	P21243	252 aa	Known RBP	1.07	□□□□□ -2.24
RLM1	YPL089C	SNC2	P33328	115 aa		1.07	□□□□□ -2.24
RLM1	YPL089C	MAK5	P38112	773 aa	Predicted RBP	1.07	□□□□□ -2.24
RLM1	YPL089C	PHO88	P38264	188 aa	Predicted RBP	1.07	□□□□□ -2.24
RLM1	YPL089C	AIM2	P39721	246 aa		1.07	□□□□□ -2.24
RLM1	YPL089C	YER076C	P40049	302 aa		1.07	□□□□□ -2.24
RLM1	YPL089C	YKE4	P40544	346 aa		1.07	□□□□□ -2.24
RLM1	YPL089C	TIR3	P40552	269 aa		1.07	□□□□□ -2.24
RLM1	YPL089C	RPL33B	P41056	107 aa	Known RBP	1.07	□□□□□ -2.24
RLM1	YPL089C	SKI6	P46948	246 aa	Predicted RBP	1.07	□□□□□ -2.24
RLM1	YPL089C	EAF6	P47128	113 aa		1.07	□□□□□ -2.24
RLM1	YPL089C	DOC1	P53068	250 aa		1.07	□□□□□ -2.24
RLM1	YPL089C	RGM1	Q00453	211 aa		1.07	□□□□□ -2.24
RLM1	YPL089C	AIM34	Q03673	198 aa		1.07	□□□□□ -2.24
RLM1	YPL089C	CGI121	Q03705	181 aa	Known RBP	1.07	□□□□□ -2.24
RLM1	YPL089C	YOR283W	Q12040	230 aa	Known RBP	1.07	□□□□□ -2.24
RLM1	YPL089C	PEX4	P29340	183 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	OCH1	P31755	480 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	YET1	P35723	206 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	YEA4	P40004	342 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	LSM4	P40070	187 aa	Known RBP	1.06	□□□□□ -2.24
RLM1	YPL089C	SER2	P42941	309 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	PGA1	P53896	198 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	SHH4	Q06236	168 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	YOL014W	Q08110	124 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	RAS2	P01120	322 aa	Known RBP	1.06	□□□□□ -2.24
RLM1	YPL089C	CPA1	P07258	411 aa	Known RBP	1.06	□□□□□ -2.24
RLM1	YPL089C	ARO7	P32178	256 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	FMP23	P38231	175 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	FES1	P38260	290 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	OPY1	P38271	328 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	YBR285W	P38354	144 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	NVJ1	P38881	321 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	TDA4	P47153	279 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	DAN1	P47178	298 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	BOL2	P53082	120 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	YNR077C	P53758	84 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	DAD3	P69850	94 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	FSF1	Q12029	327 aa	Known RBP	1.06	□□□□□ -2.24
RLM1	YPL089C	YLR050C	Q12155	161 aa	Known RBP	1.06	□□□□□ -2.24
RLM1	YPL089C	MPD1	Q12404	318 aa	Known RBP	1.06	□□□□□ -2.24
RLM1	YPL089C	YML100W-A	Q8TGT0	57 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	ODC2	Q99297	307 aa		1.06	□□□□□ -2.24
RLM1	YPL089C	SEC14	P24280	304 aa	Known RBP	1.05	□□□□□ -2.24
RLM1	YPL089C	YKL102C	P34249	101 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	KDX1	P36005	433 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	AME1	P38313	324 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	YHR022C	P38763	256 aa		1.05	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 843.3 ms