RNA–Protein interactions for RNA: YOR075W

UFE1, Transcript of t-SNARE protein required for retrograde vesicular traffic, yeastyeast

Gene UFE1, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFE1YOR075W YER076CP40049 302 aa1.65□□□□□ -2.15
UFE1YOR075W CWC23P52868 283 aaPredicted RBP1.65□□□□□ -2.15
UFE1YOR075W YHR214C-EQ8TGK0 99 aa1.65□□□□□ -2.15
UFE1YOR075W YDR157WA0A023PZE8 133 aa1.64□□□□□ -2.15
UFE1YOR075W YLR236CA0A023PZG4 107 aa1.64□□□□□ -2.15
UFE1YOR075W RPL25P04456 142 aaKnown RBP1.64□□□□□ -2.15
UFE1YOR075W LSM7P53905 115 aaKnown RBP1.64□□□□□ -2.15
UFE1YOR075W COG5P53951 403 aa1.64□□□□□ -2.15
UFE1YOR075W YFR032C-BQ8TGU2 87 aa1.64□□□□□ -2.15
UFE1YOR075W CPA1P07258 411 aaKnown RBP1.63□□□□□ -2.15
UFE1YOR075W TRM5P38793 499 aa1.63□□□□□ -2.15
UFE1YOR075W YDR274CP87283 123 aa1.63□□□□□ -2.15
UFE1YOR075W UBC7Q02159 165 aa1.63□□□□□ -2.15
UFE1YOR075W PET191Q02772 108 aa1.63□□□□□ -2.15
UFE1YOR075W ATP15P21306 62 aa1.62□□□□□ -2.15
UFE1YOR075W PGA2P53903 129 aa1.62□□□□□ -2.15
UFE1YOR075W CUE4Q04201 117 aaPredicted RBP1.62□□□□□ -2.15
UFE1YOR075W YNG1Q08465 219 aa1.62□□□□□ -2.15
UFE1YOR075W MER1P16523 270 aa1.61□□□□□ -2.15
UFE1YOR075W CKS1P20486 150 aaKnown RBP1.61□□□□□ -2.15
UFE1YOR075W SPS18P32572 300 aa1.61□□□□□ -2.15
UFE1YOR075W YCR087C-AP37263 153 aa1.61□□□□□ -2.15
UFE1YOR075W HMF1P40037 129 aaKnown RBP1.61□□□□□ -2.15
UFE1YOR075W MDM32Q12171 622 aa1.61□□□□□ -2.15
UFE1YOR075W CYR1P08678 2026 aaKnown RBP1.61□□□□□ -2.15
UFE1YOR075W YIL177CP40434 1758 aa1.6□□□□□ -2.15
UFE1YOR075W YJL225CP40889 1758 aa1.6□□□□□ -2.15
UFE1YOR075W VAR1P02381 398 aa1.6□□□□□ -2.15
UFE1YOR075W SEC11P15367 167 aa1.6□□□□□ -2.15
UFE1YOR075W OPY1P38271 328 aa1.6□□□□□ -2.15
UFE1YOR075W IKI1P38874 309 aa1.6□□□□□ -2.15
UFE1YOR075W RIO2P40160 425 aaKnown RBP1.6□□□□□ -2.15
UFE1YOR075W BNA7Q04066 261 aa1.6□□□□□ -2.15
UFE1YOR075W YNL146C-AQ3E7Z1 64 aa1.6□□□□□ -2.15
UFE1YOR075W MSB2P32334 1306 aa1.6□□□□□ -2.15
UFE1YOR075W IKI3Q06706 1349 aaKnown RBP1.6□□□□□ -2.15
UFE1YOR075W ARG80P07249 177 aa1.59□□□□□ -2.15
UFE1YOR075W RPL27AP0C2H6 136 aaKnown RBP1.59□□□□□ -2.15
UFE1YOR075W TAF14P35189 244 aa1.59□□□□□ -2.15
UFE1YOR075W KDX1P36005 433 aa1.59□□□□□ -2.15
UFE1YOR075W YER034WP40022 185 aaKnown RBP1.59□□□□□ -2.15
UFE1YOR075W RNH1Q04740 348 aa1.59□□□□□ -2.15
UFE1YOR075W VMA22P38784 181 aa1.58□□□□□ -2.16
UFE1YOR075W HNT1Q04344 158 aaKnown RBP1.58□□□□□ -2.16
UFE1YOR075W RAD28Q12021 506 aa1.58□□□□□ -2.16
UFE1YOR075W ODC2Q99297 307 aa1.58□□□□□ -2.16
UFE1YOR075W YAE1P47118 141 aaPredicted RBP1.56□□□□□ -2.16
UFE1YOR075W YHR007C-AQ07074 71 aa1.56□□□□□ -2.16
UFE1YOR075W YOL160WQ08321 113 aa1.56□□□□□ -2.16
UFE1YOR075W GIS3Q12418 502 aa1.56□□□□□ -2.16
UFE1YOR075W RFA3P26755 122 aaKnown RBP1.55□□□□□ -2.16
UFE1YOR075W OCH1P31755 480 aa1.55□□□□□ -2.16
UFE1YOR075W ERG10P41338 398 aaKnown RBP1.55□□□□□ -2.16
UFE1YOR075W RCE1Q03530 315 aa1.55□□□□□ -2.16
UFE1YOR075W GGA1Q06336 557 aa1.55□□□□□ -2.16
UFE1YOR075W HTB1P02293 131 aaKnown RBP1.54□□□□□ -2.16
UFE1YOR075W HTB2P02294 131 aa1.54□□□□□ -2.16
UFE1YOR075W SPO13P23624 291 aa1.54□□□□□ -2.16
UFE1YOR075W FLX1P40464 311 aa1.54□□□□□ -2.16
UFE1YOR075W ARO8P53090 500 aaKnown RBP1.54□□□□□ -2.16
UFE1YOR075W MPC3P53311 146 aa1.54□□□□□ -2.16
UFE1YOR075W TIM11P81449 96 aaPredicted RBP1.54□□□□□ -2.16
UFE1YOR075W RPB4P20433 221 aaPredicted RBP1.53□□□□□ -2.16
UFE1YOR075W YCR090CP25654 182 aaKnown RBP1.53□□□□□ -2.16
UFE1YOR075W PAN3P36102 679 aaPredicted RBP1.53□□□□□ -2.16
UFE1YOR075W ECM4P36156 370 aa1.53□□□□□ -2.16
UFE1YOR075W EDC3P39998 551 aaKnown RBP1.53□□□□□ -2.16
UFE1YOR075W AIM25P47140 327 aa1.53□□□□□ -2.16
UFE1YOR075W DGA1Q08650 418 aa1.53□□□□□ -2.16
UFE1YOR075W POR1P04840 283 aaKnown RBP1.52□□□□□ -2.17
UFE1YOR075W CNB1P25296 175 aa1.52□□□□□ -2.17
UFE1YOR075W NTG1P31378 399 aa1.52□□□□□ -2.17
UFE1YOR075W YNL247WP53852 767 aaKnown RBP1.52□□□□□ -2.17
UFE1YOR075W CWC27Q02770 301 aa1.52□□□□□ -2.17
UFE1YOR075W YMR226CQ05016 267 aaKnown RBP1.52□□□□□ -2.17
UFE1YOR075W YPR174CQ06616 221 aaPredicted RBP1.52□□□□□ -2.17
UFE1YOR075W TVP23P38962 199 aa1.51□□□□□ -2.17
UFE1YOR075W YPL073CP40323 161 aa1.51□□□□□ -2.17
UFE1YOR075W GET1P53192 235 aa1.51□□□□□ -2.17
UFE1YOR075W DYN3Q04949 312 aa1.51□□□□□ -2.17
UFE1YOR075W FUS2Q05670 677 aa1.51□□□□□ -2.17
UFE1YOR075W MDM35O60200 86 aa1.5□□□□□ -2.17
UFE1YOR075W AQY2P0CD90 149 aa1.5□□□□□ -2.17
UFE1YOR075W ASF2P32448 525 aaPredicted RBP1.5□□□□□ -2.17
UFE1YOR075W AIM2P39721 246 aa1.5□□□□□ -2.17
UFE1YOR075W YEA4P40004 342 aa1.5□□□□□ -2.17
UFE1YOR075W SKI6P46948 246 aaPredicted RBP1.5□□□□□ -2.17
UFE1YOR075W YRA1Q12159 226 aaKnown RBP1.5□□□□□ -2.17
UFE1YOR075W MBF1O14467 151 aaKnown RBP1.49□□□□□ -2.17
UFE1YOR075W CDC36P06100 191 aaPredicted RBP1.49□□□□□ -2.17
UFE1YOR075W YPK2P18961 677 aa1.49□□□□□ -2.17
UFE1YOR075W YHL042WP38729 150 aa1.49□□□□□ -2.17
UFE1YOR075W YEL067CP39978 195 aa1.49□□□□□ -2.17
UFE1YOR075W YER134CP40081 178 aa1.49□□□□□ -2.17
UFE1YOR075W RFC4P40339 323 aaKnown RBP1.49□□□□□ -2.17
UFE1YOR075W HYR1P40581 163 aaKnown RBP1.48□□□□□ -2.17
UFE1YOR075W SER2P42941 309 aa1.48□□□□□ -2.17
UFE1YOR075W YFL065CP43539 102 aa1.48□□□□□ -2.17
UFE1YOR075W MRPS17Q03246 237 aaPredicted RBP1.48□□□□□ -2.17
UFE1YOR075W MRS1P07266 363 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 81 ms