RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W NRK1P53915 240 aa1.68□□□□□ -2.14
PEP12YOR036W SNO1Q03144 224 aa1.68□□□□□ -2.14
PEP12YOR036W SPG3Q04398 127 aaPredicted RBP1.68□□□□□ -2.14
PEP12YOR036W NOC4Q06512 552 aaPredicted RBP1.68□□□□□ -2.14
PEP12YOR036W TIM9O74700 87 aa1.67□□□□□ -2.14
PEP12YOR036W QCR2P07257 368 aa1.67□□□□□ -2.14
PEP12YOR036W ATP15P21306 62 aa1.67□□□□□ -2.14
PEP12YOR036W PEX4P29340 183 aa1.67□□□□□ -2.14
PEP12YOR036W TRR1P29509 319 aaKnown RBP1.67□□□□□ -2.14
PEP12YOR036W FMP23P38231 175 aa1.67□□□□□ -2.14
PEP12YOR036W FES1P38260 290 aa1.67□□□□□ -2.14
PEP12YOR036W AME1P38313 324 aa1.67□□□□□ -2.14
PEP12YOR036W GLE2P40066 365 aa1.67□□□□□ -2.14
PEP12YOR036W YER121WP40076 114 aa1.67□□□□□ -2.14
PEP12YOR036W PDS1P40316 373 aaPredicted RBP1.67□□□□□ -2.14
PEP12YOR036W PGD1P40356 397 aa1.67□□□□□ -2.14
PEP12YOR036W ICE2P40499 491 aa1.67□□□□□ -2.14
PEP12YOR036W SKI6P46948 246 aaPredicted RBP1.67□□□□□ -2.14
PEP12YOR036W DOC1P53068 250 aa1.67□□□□□ -2.14
PEP12YOR036W YNL140CP53910 189 aa1.67□□□□□ -2.14
PEP12YOR036W MRPS8Q03799 155 aa1.67□□□□□ -2.14
PEP12YOR036W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
PEP12YOR036W YOL024WQ08172 172 aa1.67□□□□□ -2.14
PEP12YOR036W ATO3Q12359 275 aa1.67□□□□□ -2.14
PEP12YOR036W IGO2Q9P305 131 aa1.67□□□□□ -2.14
PEP12YOR036W MBF1O14467 151 aaKnown RBP1.66□□□□□ -2.14
PEP12YOR036W SNF4P12904 322 aa1.66□□□□□ -2.14
PEP12YOR036W GCY1P14065 312 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
PEP12YOR036W SCL1P21243 252 aaKnown RBP1.66□□□□□ -2.14
PEP12YOR036W TAH1P25638 111 aaPredicted RBP1.66□□□□□ -2.14
PEP12YOR036W OCH1P31755 480 aa1.66□□□□□ -2.14
PEP12YOR036W UBC6P33296 250 aaPredicted RBP1.66□□□□□ -2.14
PEP12YOR036W UMP1P38293 148 aa1.66□□□□□ -2.14
PEP12YOR036W YKE4P40544 346 aa1.66□□□□□ -2.14
PEP12YOR036W CIS3P47001 227 aa1.66□□□□□ -2.14
PEP12YOR036W ARP3P47117 449 aaKnown RBP1.66□□□□□ -2.14
PEP12YOR036W JAC1P53193 184 aa1.66□□□□□ -2.14
PEP12YOR036W YNR062CP53748 327 aa1.66□□□□□ -2.14
PEP12YOR036W YLR460CP54007 376 aa1.66□□□□□ -2.14
PEP12YOR036W RGM1Q00453 211 aa1.66□□□□□ -2.14
PEP12YOR036W GRX8Q05926 109 aa1.66□□□□□ -2.14
PEP12YOR036W YLR036CQ07986 203 aa1.66□□□□□ -2.14
PEP12YOR036W YOR283WQ12040 230 aaKnown RBP1.66□□□□□ -2.14
PEP12YOR036W RIO1Q12196 484 aaKnown RBP1.66□□□□□ -2.14
PEP12YOR036W YDL085C-AQ3E7B7 68 aaKnown RBP1.66□□□□□ -2.14
PEP12YOR036W CCH1P50077 2039 aa1.66□□□□□ -2.14
PEP12YOR036W CKS1P20486 150 aaKnown RBP1.65□□□□□ -2.15
PEP12YOR036W MRPS28P21771 286 aa1.65□□□□□ -2.15
PEP12YOR036W TRX3P25372 127 aa1.65□□□□□ -2.15
PEP12YOR036W SNC2P33328 115 aa1.65□□□□□ -2.15
PEP12YOR036W CLG1P35190 452 aa1.65□□□□□ -2.15
PEP12YOR036W MAK5P38112 773 aaPredicted RBP1.65□□□□□ -2.15
PEP12YOR036W PHO88P38264 188 aaPredicted RBP1.65□□□□□ -2.15
PEP12YOR036W SVP26P38869 228 aa1.65□□□□□ -2.15
PEP12YOR036W GVP36P40531 326 aaKnown RBP1.65□□□□□ -2.15
PEP12YOR036W RPL33BP41056 107 aaKnown RBP1.65□□□□□ -2.15
PEP12YOR036W HNT1Q04344 158 aaKnown RBP1.65□□□□□ -2.15
PEP12YOR036W RPS28BP0C0X0 67 aaKnown RBP1.64□□□□□ -2.15
PEP12YOR036W MGT1P26188 188 aa1.64□□□□□ -2.15
PEP12YOR036W YKR041WP36134 250 aa1.64□□□□□ -2.15
PEP12YOR036W FIG1P38224 298 aa1.64□□□□□ -2.15
PEP12YOR036W ERV15P38312 142 aa1.64□□□□□ -2.15
PEP12YOR036W TMA22P47089 198 aaPredicted RBP1.64□□□□□ -2.15
PEP12YOR036W YGL235WP53071 178 aa1.64□□□□□ -2.15
PEP12YOR036W BOL2P53082 120 aa1.64□□□□□ -2.15
PEP12YOR036W ARO8P53090 500 aaKnown RBP1.64□□□□□ -2.15
PEP12YOR036W YNL247WP53852 767 aaKnown RBP1.64□□□□□ -2.15
PEP12YOR036W RRP17Q04031 235 aaPredicted RBP1.64□□□□□ -2.15
PEP12YOR036W YMR315WQ04869 349 aaKnown RBP1.64□□□□□ -2.15
PEP12YOR036W FSF1Q12029 327 aaKnown RBP1.64□□□□□ -2.15
PEP12YOR036W RPS28AQ3E7X9 67 aaPredicted RBP1.64□□□□□ -2.15
PEP12YOR036W ODC2Q99297 307 aa1.64□□□□□ -2.15
PEP12YOR036W YCR090CP25654 182 aaKnown RBP1.63□□□□□ -2.15
PEP12YOR036W ARO7P32178 256 aa1.63□□□□□ -2.15
PEP12YOR036W SHE2P36068 246 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
PEP12YOR036W OPY1P38271 328 aa1.63□□□□□ -2.15
PEP12YOR036W YBR285WP38354 144 aa1.63□□□□□ -2.15
PEP12YOR036W FCY21P40039 528 aa1.63□□□□□ -2.15
PEP12YOR036W TIR3P40552 269 aa1.63□□□□□ -2.15
PEP12YOR036W FMP32P43557 207 aa1.63□□□□□ -2.15
PEP12YOR036W YJL027CP47063 138 aaPredicted RBP1.63□□□□□ -2.15
PEP12YOR036W DAN1P47178 298 aa1.63□□□□□ -2.15
PEP12YOR036W YLR031WQ07978 186 aa1.63□□□□□ -2.15
PEP12YOR036W RAS2P01120 322 aaKnown RBP1.62□□□□□ -2.15
PEP12YOR036W DDI2P0CH63 225 aa1.62□□□□□ -2.15
PEP12YOR036W DDI3P0CH64 225 aa1.62□□□□□ -2.15
PEP12YOR036W YET1P35723 206 aa1.62□□□□□ -2.15
PEP12YOR036W KDX1P36005 433 aa1.62□□□□□ -2.15
PEP12YOR036W DER1P38307 211 aa1.62□□□□□ -2.15
PEP12YOR036W YER076CP40049 302 aa1.62□□□□□ -2.15
PEP12YOR036W SER2P42941 309 aa1.62□□□□□ -2.15
PEP12YOR036W YFH7P43591 353 aa1.62□□□□□ -2.15
PEP12YOR036W YJR111CP47148 283 aaKnown RBP1.62□□□□□ -2.15
PEP12YOR036W TDA4P47153 279 aa1.62□□□□□ -2.15
PEP12YOR036W PGA1P53896 198 aa1.62□□□□□ -2.15
PEP12YOR036W DYN3Q04949 312 aa1.62□□□□□ -2.15
PEP12YOR036W BRX1Q08235 291 aaKnown RBP1.62□□□□□ -2.15
PEP12YOR036W DGA1Q08650 418 aa1.62□□□□□ -2.15
PEP12YOR036W YLR050CQ12155 161 aaKnown RBP1.62□□□□□ -2.15
PEP12YOR036W RPS24AP0CX31 135 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms