RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C RAS2P01120 322 aaKnown RBP2.18□□□□□ -2.06
WHI3YNL197C URA5P13298 226 aaKnown RBP2.18□□□□□ -2.06
WHI3YNL197C PET9P18239 318 aaKnown RBP2.18□□□□□ -2.06
WHI3YNL197C RAD51P25454 400 aa2.18□□□□□ -2.06
WHI3YNL197C YCR090CP25654 182 aaKnown RBP2.18□□□□□ -2.06
WHI3YNL197C MDH3P32419 343 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
WHI3YNL197C PDS1P40316 373 aaPredicted RBP2.18□□□□□ -2.06
WHI3YNL197C DOC1P53068 250 aa2.18□□□□□ -2.06
WHI3YNL197C JAC1P53193 184 aa2.18□□□□□ -2.06
WHI3YNL197C MBF1O14467 151 aaKnown RBP2.17□□□□□ -2.06
WHI3YNL197C SNF6P18888 332 aa2.17□□□□□ -2.06
WHI3YNL197C SKG1P36169 355 aa2.17□□□□□ -2.06
WHI3YNL197C PGD1P40356 397 aa2.17□□□□□ -2.06
WHI3YNL197C SKI6P46948 246 aaPredicted RBP2.17□□□□□ -2.06
WHI3YNL197C DAN1P47178 298 aa2.17□□□□□ -2.06
WHI3YNL197C YNR062CP53748 327 aa2.17□□□□□ -2.06
WHI3YNL197C SCL1P21243 252 aaKnown RBP2.16□□□□□ -2.06
WHI3YNL197C TAH1P25638 111 aaPredicted RBP2.16□□□□□ -2.06
WHI3YNL197C PEX4P29340 183 aa2.16□□□□□ -2.06
WHI3YNL197C OCH1P31755 480 aa2.16□□□□□ -2.06
WHI3YNL197C ECM4P36156 370 aa2.16□□□□□ -2.06
WHI3YNL197C FCY21P40039 528 aa2.16□□□□□ -2.06
WHI3YNL197C GLE2P40066 365 aa2.16□□□□□ -2.06
WHI3YNL197C YGR219WP53307 113 aa2.16□□□□□ -2.06
WHI3YNL197C FUS2Q05670 677 aa2.16□□□□□ -2.06
WHI3YNL197C YET3Q07451 203 aa2.16□□□□□ -2.06
WHI3YNL197C FBA1P14540 359 aaKnown RBP2.16□□□□□ -2.06
WHI3YNL197C CLG1P35190 452 aa2.16□□□□□ -2.06
WHI3YNL197C GVP36P40531 326 aaKnown RBP2.16□□□□□ -2.06
WHI3YNL197C BOL2P53082 120 aa2.16□□□□□ -2.06
WHI3YNL197C RGM1Q00453 211 aa2.16□□□□□ -2.06
WHI3YNL197C YMR315WQ04869 349 aaKnown RBP2.16□□□□□ -2.06
WHI3YNL197C RIO1Q12196 484 aaKnown RBP2.16□□□□□ -2.06
WHI3YNL197C MAK5P38112 773 aaPredicted RBP2.15□□□□□ -2.07
WHI3YNL197C UMP1P38293 148 aa2.15□□□□□ -2.07
WHI3YNL197C CIS3P47001 227 aa2.15□□□□□ -2.07
WHI3YNL197C YJL027CP47063 138 aaPredicted RBP2.15□□□□□ -2.07
WHI3YNL197C YNR077CP53758 84 aa2.15□□□□□ -2.07
WHI3YNL197C YLR460CP54007 376 aa2.15□□□□□ -2.07
WHI3YNL197C DAD3P69850 94 aa2.15□□□□□ -2.07
WHI3YNL197C TRR1P29509 319 aaKnown RBP2.14□□□□□ -2.07
WHI3YNL197C ARO7P32178 256 aa2.14□□□□□ -2.07
WHI3YNL197C PHO88P38264 188 aaPredicted RBP2.14□□□□□ -2.07
WHI3YNL197C ERV15P38312 142 aa2.14□□□□□ -2.07
WHI3YNL197C YJR111CP47148 283 aaKnown RBP2.14□□□□□ -2.07
WHI3YNL197C ARO8P53090 500 aaKnown RBP2.14□□□□□ -2.07
WHI3YNL197C YNL140CP53910 189 aa2.14□□□□□ -2.07
WHI3YNL197C YDR274CP87283 123 aa2.14□□□□□ -2.07
WHI3YNL197C HNT1Q04344 158 aaKnown RBP2.14□□□□□ -2.07
WHI3YNL197C CMC2Q3E7A4 109 aa2.14□□□□□ -2.07
WHI3YNL197C OPY1P38271 328 aa2.14□□□□□ -2.07
WHI3YNL197C YKE4P40544 346 aa2.14□□□□□ -2.07
WHI3YNL197C RPL33BP41056 107 aaKnown RBP2.14□□□□□ -2.07
WHI3YNL197C YNL247WP53852 767 aaKnown RBP2.14□□□□□ -2.07
WHI3YNL197C PRM15Q03262 622 aa2.14□□□□□ -2.07
WHI3YNL197C YLR036CQ07986 203 aa2.14□□□□□ -2.07
WHI3YNL197C BRX1Q08235 291 aaKnown RBP2.14□□□□□ -2.07
WHI3YNL197C SNF4P12904 322 aa2.13□□□□□ -2.07
WHI3YNL197C MRPS28P21771 286 aa2.13□□□□□ -2.07
WHI3YNL197C YER121WP40076 114 aa2.13□□□□□ -2.07
WHI3YNL197C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
WHI3YNL197C YDL085C-AQ3E7B7 68 aaKnown RBP2.13□□□□□ -2.07
WHI3YNL197C PDR18P53756 1333 aa2.12□□□□□ -2.07
WHI3YNL197C CKS1P20486 150 aaKnown RBP2.12□□□□□ -2.07
WHI3YNL197C TRX3P25372 127 aa2.12□□□□□ -2.07
WHI3YNL197C TIR3P40552 269 aa2.12□□□□□ -2.07
WHI3YNL197C DGA1Q08650 418 aa2.12□□□□□ -2.07
WHI3YNL197C FSF1Q12029 327 aaKnown RBP2.12□□□□□ -2.07
WHI3YNL197C YOR283WQ12040 230 aaKnown RBP2.12□□□□□ -2.07
WHI3YNL197C DDI2P0CH63 225 aa2.12□□□□□ -2.07
WHI3YNL197C DDI3P0CH64 225 aa2.12□□□□□ -2.07
WHI3YNL197C ARC19P33204 171 aaKnown RBP2.12□□□□□ -2.07
WHI3YNL197C NVJ1P38881 321 aa2.12□□□□□ -2.07
WHI3YNL197C YER076CP40049 302 aa2.12□□□□□ -2.07
WHI3YNL197C CPA1P07258 411 aaKnown RBP2.11□□□□□ -2.07
WHI3YNL197C YBR285WP38354 144 aa2.11□□□□□ -2.07
WHI3YNL197C SER2P42941 309 aa2.11□□□□□ -2.07
WHI3YNL197C MPC3P53311 146 aa2.11□□□□□ -2.07
WHI3YNL197C IGO1P53897 168 aa2.11□□□□□ -2.07
WHI3YNL197C YLR031WQ07978 186 aa2.11□□□□□ -2.07
WHI3YNL197C ODC2Q99297 307 aa2.11□□□□□ -2.07
WHI3YNL197C SNC2P33328 115 aa2.1□□□□□ -2.07
WHI3YNL197C KDX1P36005 433 aa2.1□□□□□ -2.07
WHI3YNL197C SRP14P38985 146 aa2.1□□□□□ -2.07
WHI3YNL197C FMP32P43557 207 aa2.1□□□□□ -2.07
WHI3YNL197C EAF6P47128 113 aa2.1□□□□□ -2.07
WHI3YNL197C NAT3Q06504 195 aa2.1□□□□□ -2.07
WHI3YNL197C AHC2P25649 128 aa2.1□□□□□ -2.07
WHI3YNL197C MGT1P26188 188 aa2.1□□□□□ -2.07
WHI3YNL197C YET1P35723 206 aa2.1□□□□□ -2.07
WHI3YNL197C YHR022CP38763 256 aa2.1□□□□□ -2.07
WHI3YNL197C SVP26P38869 228 aa2.1□□□□□ -2.07
WHI3YNL197C YEA4P40004 342 aa2.1□□□□□ -2.07
WHI3YNL197C TDA4P47153 279 aa2.1□□□□□ -2.07
WHI3YNL197C PGA1P53896 198 aa2.1□□□□□ -2.07
WHI3YNL197C LSM4P40070 187 aaKnown RBP2.09□□□□□ -2.07
WHI3YNL197C CYT2Q00873 224 aa2.09□□□□□ -2.07
WHI3YNL197C AIM34Q03673 198 aa2.09□□□□□ -2.07
WHI3YNL197C RPS24AP0CX31 135 aaKnown RBP2.09□□□□□ -2.08
WHI3YNL197C RPS24BP0CX32 135 aaKnown RBP2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 108.1 ms