RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W SNT2P53127 1403 aa1.06□□□□□ -2.24
CTK3YML112W YHR139C-AO13536 103 aa1.06□□□□□ -2.24
CTK3YML112W FPR1P20081 114 aaKnown RBP1.06□□□□□ -2.24
CTK3YML112W RNA15P25299 296 aaPredicted RBP1.06□□□□□ -2.24
CTK3YML112W TRX3P25372 127 aa1.06□□□□□ -2.24
CTK3YML112W HSP30P25619 332 aa1.06□□□□□ -2.24
CTK3YML112W TRR1P29509 319 aaKnown RBP1.06□□□□□ -2.24
CTK3YML112W HOM6P31116 359 aaKnown RBP1.06□□□□□ -2.24
CTK3YML112W UTP11P34247 250 aaPredicted RBP1.06□□□□□ -2.24
CTK3YML112W SRY1P36007 326 aa1.06□□□□□ -2.24
CTK3YML112W YCR087C-AP37263 153 aa1.06□□□□□ -2.24
CTK3YML112W COX15P40086 486 aa1.06□□□□□ -2.24
CTK3YML112W SMD3P43321 101 aaKnown RBP1.06□□□□□ -2.24
CTK3YML112W ILM1P47155 203 aa1.06□□□□□ -2.24
CTK3YML112W VMA10P48836 114 aaKnown RBP1.06□□□□□ -2.24
CTK3YML112W NUP57P48837 541 aa1.06□□□□□ -2.24
CTK3YML112W USE1P53146 245 aa1.06□□□□□ -2.24
CTK3YML112W TOS8P53147 276 aa1.06□□□□□ -2.24
CTK3YML112W RHO3Q00245 231 aaKnown RBP1.06□□□□□ -2.24
CTK3YML112W PET191Q02772 108 aa1.06□□□□□ -2.24
CTK3YML112W AIM34Q03673 198 aa1.06□□□□□ -2.24
CTK3YML112W YMR315WQ04869 349 aaKnown RBP1.06□□□□□ -2.24
CTK3YML112W HEM25Q07534 307 aa1.06□□□□□ -2.24
CTK3YML112W YOL160WQ08321 113 aa1.06□□□□□ -2.24
CTK3YML112W YPR202WQ08993 238 aa1.06□□□□□ -2.24
CTK3YML112W YLR053CQ12026 108 aa1.06□□□□□ -2.24
CTK3YML112W YCT1Q12235 531 aa1.06□□□□□ -2.24
CTK3YML112W YPL229WQ99395 206 aa1.06□□□□□ -2.24
CTK3YML112W HTL1Q9URQ5 78 aa1.06□□□□□ -2.24
CTK3YML112W SSN2P38931 1420 aa1.06□□□□□ -2.24
CTK3YML112W YOR1P53049 1477 aa1.05□□□□□ -2.24
CTK3YML112W CDC28P00546 298 aaKnown RBP1.05□□□□□ -2.24
CTK3YML112W DDI2P0CH63 225 aa1.05□□□□□ -2.24
CTK3YML112W DDI3P0CH64 225 aa1.05□□□□□ -2.24
CTK3YML112W YCR101CP25607 182 aa1.05□□□□□ -2.24
CTK3YML112W TAH1P25638 111 aaPredicted RBP1.05□□□□□ -2.24
CTK3YML112W YCR090CP25654 182 aaKnown RBP1.05□□□□□ -2.24
CTK3YML112W GSP1P32835 219 aaKnown RBP1.05□□□□□ -2.24
CTK3YML112W GSP2P32836 220 aaKnown RBP1.05□□□□□ -2.24
CTK3YML112W UPS2P35200 230 aa1.05□□□□□ -2.24
CTK3YML112W TRS20P38334 175 aa1.05□□□□□ -2.24
CTK3YML112W CUE1P38428 203 aa1.05□□□□□ -2.24
CTK3YML112W CIN5P40917 295 aa1.05□□□□□ -2.24
CTK3YML112W MIC26P50087 233 aa1.05□□□□□ -2.24
CTK3YML112W NSA1P53136 463 aaPredicted RBP1.05□□□□□ -2.24
CTK3YML112W YGL034CP53186 121 aa1.05□□□□□ -2.24
CTK3YML112W MPA43P53583 542 aaPredicted RBP1.05□□□□□ -2.24
CTK3YML112W COG5P53951 403 aa1.05□□□□□ -2.24
CTK3YML112W TMA20P89886 181 aaPredicted RBP1.05□□□□□ -2.24
CTK3YML112W ARO80Q04052 950 aa1.05□□□□□ -2.24
CTK3YML112W COQ10Q08058 207 aa1.05□□□□□ -2.24
CTK3YML112W YNG1Q08465 219 aa1.05□□□□□ -2.24
CTK3YML112W MSA1Q08471 629 aa1.05□□□□□ -2.24
CTK3YML112W YOR020W-AQ3E824 90 aa1.05□□□□□ -2.24
CTK3YML112W YHR214C-EQ8TGK0 99 aa1.05□□□□□ -2.24
CTK3YML112W IGO2Q9P305 131 aa1.05□□□□□ -2.24
CTK3YML112W MRS1P07266 363 aa1.04□□□□□ -2.24
CTK3YML112W GRX2P17695 143 aaKnown RBP1.04□□□□□ -2.24
CTK3YML112W RPS1AP33442 255 aaKnown RBP1.04□□□□□ -2.24
CTK3YML112W ECM33P38248 429 aaKnown RBP1.04□□□□□ -2.24
CTK3YML112W CSH1P38287 376 aa1.04□□□□□ -2.24
CTK3YML112W YBR220CP38318 560 aa1.04□□□□□ -2.24
CTK3YML112W SHG1P38337 142 aa1.04□□□□□ -2.24
CTK3YML112W PRS3P38689 320 aaKnown RBP1.04□□□□□ -2.24
CTK3YML112W NVJ1P38881 321 aa1.04□□□□□ -2.24
CTK3YML112W PHB1P40961 287 aa1.04□□□□□ -2.24
CTK3YML112W YJR015WP47090 510 aa1.04□□□□□ -2.24
CTK3YML112W AIM25P47140 327 aa1.04□□□□□ -2.24
CTK3YML112W SOL1P50278 321 aa1.04□□□□□ -2.24
CTK3YML112W BRR6P53062 197 aa1.04□□□□□ -2.24
CTK3YML112W JAC1P53193 184 aa1.04□□□□□ -2.24
CTK3YML112W PDR17P53844 350 aa1.04□□□□□ -2.24
CTK3YML112W HSK3P69852 69 aa1.04□□□□□ -2.24
CTK3YML112W NUP49Q02199 472 aa1.04□□□□□ -2.24
CTK3YML112W ABF2Q02486 183 aa1.04□□□□□ -2.24
CTK3YML112W YDR249CQ03787 373 aa1.04□□□□□ -2.24
CTK3YML112W DYN3Q04949 312 aa1.04□□□□□ -2.24
CTK3YML112W YPD1Q07688 167 aa1.04□□□□□ -2.24
CTK3YML112W YLR031WQ07978 186 aa1.04□□□□□ -2.24
CTK3YML112W YOR186WQ08560 144 aa1.04□□□□□ -2.24
CTK3YML112W NSL1Q12143 216 aa1.04□□□□□ -2.24
CTK3YML112W RDI1Q12434 202 aa1.04□□□□□ -2.24
CTK3YML112W PEX11Q12462 236 aa1.04□□□□□ -2.24
CTK3YML112W Q0144Q9ZZW2 109 aa1.04□□□□□ -2.24
CTK3YML112W SKI3P17883 1432 aaKnown RBP1.04□□□□□ -2.24
CTK3YML112W YIL177CP40434 1758 aa1.03□□□□□ -2.24
CTK3YML112W YJL225CP40889 1758 aa1.03□□□□□ -2.24
CTK3YML112W SPT3P06844 337 aa1.03□□□□□ -2.24
CTK3YML112W BCY1P07278 416 aaKnown RBP1.03□□□□□ -2.24
CTK3YML112W NHP6AP11632 93 aaKnown RBP1.03□□□□□ -2.24
CTK3YML112W MRPS28P21771 286 aa1.03□□□□□ -2.24
CTK3YML112W BUD23P25627 275 aaPredicted RBP1.03□□□□□ -2.24
CTK3YML112W OCH1P31755 480 aa1.03□□□□□ -2.24
CTK3YML112W ARO7P32178 256 aa1.03□□□□□ -2.24
CTK3YML112W YKL075CP36083 450 aa1.03□□□□□ -2.24
CTK3YML112W MRPL28P36527 147 aa1.03□□□□□ -2.24
CTK3YML112W YBR285WP38354 144 aa1.03□□□□□ -2.24
CTK3YML112W YHR127WP38833 243 aaKnown RBP1.03□□□□□ -2.24
CTK3YML112W SVP26P38869 228 aa1.03□□□□□ -2.24
CTK3YML112W RPL13BP40212 199 aaKnown RBP1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms