RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeastyeast

Gene VTA1, Length 993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTA1YLR181C AGX1P43567 385 aa3.28□□□□□ -1.88
VTA1YLR181C FAR7P43592 221 aa3.28□□□□□ -1.88
VTA1YLR181C YJL028WP47062 111 aa3.28□□□□□ -1.88
VTA1YLR181C RAD17P48581 401 aa3.28□□□□□ -1.88
VTA1YLR181C SYF2P53277 215 aaPredicted RBP3.28□□□□□ -1.88
VTA1YLR181C RRN5Q02983 363 aa3.28□□□□□ -1.88
VTA1YLR181C SDO1Q07953 250 aaKnown RBP3.28□□□□□ -1.88
VTA1YLR181C STT4P37297 1900 aa3.27□□□□□ -1.89
VTA1YLR181C TOM40P23644 387 aaKnown RBP3.27□□□□□ -1.89
VTA1YLR181C GDH2P33327 1092 aaKnown RBP3.27□□□□□ -1.89
VTA1YLR181C LHP1P33399 275 aaKnown RBP3.27□□□□□ -1.89
VTA1YLR181C PRS4P38063 326 aaPredicted RBP3.27□□□□□ -1.89
VTA1YLR181C EGD2P38879 174 aaKnown RBP3.27□□□□□ -1.89
VTA1YLR181C AIM2P39721 246 aa3.27□□□□□ -1.89
VTA1YLR181C YER188WP40103 239 aa3.27□□□□□ -1.89
VTA1YLR181C MSS2P40990 351 aa3.27□□□□□ -1.89
VTA1YLR181C PIR5P46999 287 aa3.27□□□□□ -1.89
VTA1YLR181C PAC10P48363 199 aa3.27□□□□□ -1.89
VTA1YLR181C RHO3Q00245 231 aaKnown RBP3.27□□□□□ -1.89
VTA1YLR181C SWP1Q02795 286 aa3.27□□□□□ -1.89
VTA1YLR181C YMR099CQ03161 297 aaKnown RBP3.27□□□□□ -1.89
VTA1YLR181C BOP2Q06150 570 aa3.27□□□□□ -1.89
VTA1YLR181C YLR173WQ06247 608 aa3.27□□□□□ -1.89
VTA1YLR181C AGC1Q12482 902 aa3.27□□□□□ -1.89
VTA1YLR181C MHF1Q3E835 90 aa3.27□□□□□ -1.89
VTA1YLR181C RPS1BP23248 255 aaKnown RBP3.26□□□□□ -1.89
VTA1YLR181C PPH21P23594 369 aa3.26□□□□□ -1.89
VTA1YLR181C DPB2P24482 689 aaPredicted RBP3.26□□□□□ -1.89
VTA1YLR181C RPS5P26783 225 aaKnown RBP3.26□□□□□ -1.89
VTA1YLR181C SUI1P32911 108 aaKnown RBP3.26□□□□□ -1.89
VTA1YLR181C GOS1P38736 223 aa3.26□□□□□ -1.89
VTA1YLR181C TEM1P38987 245 aa3.26□□□□□ -1.89
VTA1YLR181C SMB1P40018 196 aaKnown RBP3.26□□□□□ -1.89
VTA1YLR181C COG3P40094 801 aa3.26□□□□□ -1.89
VTA1YLR181C YGR201CP42936 225 aa3.26□□□□□ -1.89
VTA1YLR181C BNA6P43619 295 aa3.26□□□□□ -1.89
VTA1YLR181C HOC1P47124 396 aa3.26□□□□□ -1.89
VTA1YLR181C PRM8P53174 237 aa3.26□□□□□ -1.89
VTA1YLR181C COG5P53951 403 aa3.26□□□□□ -1.89
VTA1YLR181C TLG1Q03322 224 aa3.26□□□□□ -1.89
VTA1YLR181C SPO77Q06134 477 aa3.26□□□□□ -1.89
VTA1YLR181C YLR126CQ12288 251 aa3.26□□□□□ -1.89
VTA1YLR181C SMT3Q12306 101 aaKnown RBP3.26□□□□□ -1.89
VTA1YLR181C RIB3Q99258 208 aa3.26□□□□□ -1.89
VTA1YLR181C MED11Q99278 115 aa3.26□□□□□ -1.89
VTA1YLR181C PET9P18239 318 aaKnown RBP3.25□□□□□ -1.89
VTA1YLR181C TAH1P25638 111 aaPredicted RBP3.25□□□□□ -1.89
VTA1YLR181C VMA6P32366 345 aaKnown RBP3.25□□□□□ -1.89
VTA1YLR181C JEN1P36035 616 aa3.25□□□□□ -1.89
VTA1YLR181C PRE6P40303 254 aaKnown RBP3.25□□□□□ -1.89
VTA1YLR181C CIS3P47001 227 aa3.25□□□□□ -1.89
VTA1YLR181C RBL2P48606 106 aaKnown RBP3.25□□□□□ -1.89
VTA1YLR181C ASI3P53983 676 aa3.25□□□□□ -1.89
VTA1YLR181C KRE28Q04431 385 aa3.25□□□□□ -1.89
VTA1YLR181C YML096WQ04489 525 aa3.25□□□□□ -1.89
VTA1YLR181C YOR029WQ12243 111 aa3.25□□□□□ -1.89
VTA1YLR181C IDP1P21954 428 aaKnown RBP3.24□□□□□ -1.89
VTA1YLR181C RNA15P25299 296 aaPredicted RBP3.24□□□□□ -1.89
VTA1YLR181C IDH1P28834 360 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
VTA1YLR181C ECM4P36156 370 aa3.24□□□□□ -1.89
VTA1YLR181C MAL32P38158 584 aa3.24□□□□□ -1.89
VTA1YLR181C GCN20P43535 752 aaKnown RBP3.24□□□□□ -1.89
VTA1YLR181C YJR141WP47172 347 aaPredicted RBP3.24□□□□□ -1.89
VTA1YLR181C NQM1P53228 333 aaPredicted RBP3.24□□□□□ -1.89
VTA1YLR181C MAL12P53341 584 aa3.24□□□□□ -1.89
VTA1YLR181C SSU72P53538 206 aaPredicted RBP3.24□□□□□ -1.89
VTA1YLR181C MIX17Q03667 156 aa3.24□□□□□ -1.89
VTA1YLR181C PST2Q12335 198 aaKnown RBP3.24□□□□□ -1.89
VTA1YLR181C TAO3P40468 2376 aa3.23□□□□□ -1.89
VTA1YLR181C RNP1P32385 249 aa3.23□□□□□ -1.89
VTA1YLR181C ASF2P32448 525 aaPredicted RBP3.23□□□□□ -1.89
VTA1YLR181C UTR5P32630 166 aa3.23□□□□□ -1.89
VTA1YLR181C VPS51P36116 164 aa3.23□□□□□ -1.89
VTA1YLR181C SOK1P40317 901 aa3.23□□□□□ -1.89
VTA1YLR181C RPS12P48589 143 aaKnown RBP3.23□□□□□ -1.89
VTA1YLR181C NUP49Q02199 472 aa3.23□□□□□ -1.89
VTA1YLR181C GRX5Q02784 150 aa3.23□□□□□ -1.89
VTA1YLR181C SRL4Q03085 281 aa3.23□□□□□ -1.89
VTA1YLR181C YMD8Q03697 442 aa3.23□□□□□ -1.89
VTA1YLR181C NEJ1Q06148 342 aa3.23□□□□□ -1.89
VTA1YLR181C MSH5Q12175 901 aa3.23□□□□□ -1.89
VTA1YLR181C MED4Q12343 284 aa3.23□□□□□ -1.89
VTA1YLR181C YBL008W-AQ3E821 79 aa3.23□□□□□ -1.89
VTA1YLR181C HOM6P31116 359 aaKnown RBP3.22□□□□□ -1.89
VTA1YLR181C IPT1P38954 527 aa3.22□□□□□ -1.89
VTA1YLR181C AST2P39945 430 aaKnown RBP3.22□□□□□ -1.89
VTA1YLR181C NUP57P48837 541 aa3.22□□□□□ -1.89
VTA1YLR181C SNZ1Q03148 297 aa3.22□□□□□ -1.89
VTA1YLR181C RNH202Q05635 350 aa3.22□□□□□ -1.89
VTA1YLR181C YPR147CQ06522 304 aaKnown RBP3.22□□□□□ -1.89
VTA1YLR181C YOR214CQ12282 236 aa3.22□□□□□ -1.89
VTA1YLR181C EHD3P28817 500 aa3.21□□□□□ -1.9
VTA1YLR181C ARC19P33204 171 aaKnown RBP3.21□□□□□ -1.9
VTA1YLR181C UTP11P34247 250 aaPredicted RBP3.21□□□□□ -1.9
VTA1YLR181C YOR062CP36025 268 aa3.21□□□□□ -1.9
VTA1YLR181C FES1P38260 290 aa3.21□□□□□ -1.9
VTA1YLR181C JHD2P47156 728 aaPredicted RBP3.21□□□□□ -1.9
VTA1YLR181C CTF19Q02732 369 aa3.21□□□□□ -1.9
VTA1YLR181C YPR098CQ06089 161 aa3.21□□□□□ -1.9
VTA1YLR181C YLR030WQ07967 263 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms