RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W GPM2Q12008 311 aa0.91□□□□□ -2.26
SLX4YLR135W ATO3Q12359 275 aa0.91□□□□□ -2.26
SLX4YLR135W TIM9O74700 87 aa0.9□□□□□ -2.27
SLX4YLR135W DDI2P0CH63 225 aa0.9□□□□□ -2.27
SLX4YLR135W DDI3P0CH64 225 aa0.9□□□□□ -2.27
SLX4YLR135W PET9P18239 318 aaKnown RBP0.9□□□□□ -2.27
SLX4YLR135W OCH1P31755 480 aa0.9□□□□□ -2.27
SLX4YLR135W SNC2P33328 115 aa0.9□□□□□ -2.27
SLX4YLR135W CAF4P36130 643 aa0.9□□□□□ -2.27
SLX4YLR135W YBR285WP38354 144 aa0.9□□□□□ -2.27
SLX4YLR135W GVP36P40531 326 aaKnown RBP0.9□□□□□ -2.27
SLX4YLR135W TIR3P40552 269 aa0.9□□□□□ -2.27
SLX4YLR135W YJL027CP47063 138 aaPredicted RBP0.9□□□□□ -2.27
SLX4YLR135W BOL2P53082 120 aa0.9□□□□□ -2.27
SLX4YLR135W YNR062CP53748 327 aa0.9□□□□□ -2.27
SLX4YLR135W FSF1Q12029 327 aaKnown RBP0.9□□□□□ -2.27
SLX4YLR135W RIO1Q12196 484 aaKnown RBP0.9□□□□□ -2.27
SLX4YLR135W YDL085C-AQ3E7B7 68 aaKnown RBP0.9□□□□□ -2.27
SLX4YLR135W YFR032C-BQ8TGU2 87 aa0.9□□□□□ -2.27
SLX4YLR135W MBF1O14467 151 aaKnown RBP0.89□□□□□ -2.27
SLX4YLR135W RAS2P01120 322 aaKnown RBP0.89□□□□□ -2.27
SLX4YLR135W SIR2P06700 562 aa0.89□□□□□ -2.27
SLX4YLR135W RPL35AP0CX84 120 aaKnown RBP0.89□□□□□ -2.27
SLX4YLR135W RPL35BP0CX85 120 aaKnown RBP0.89□□□□□ -2.27
SLX4YLR135W SNF4P12904 322 aa0.89□□□□□ -2.27
SLX4YLR135W CKS1P20486 150 aaKnown RBP0.89□□□□□ -2.27
SLX4YLR135W ATP15P21306 62 aa0.89□□□□□ -2.27
SLX4YLR135W NRG2P38082 220 aa0.89□□□□□ -2.27
SLX4YLR135W FCY21P40039 528 aa0.89□□□□□ -2.27
SLX4YLR135W GLE2P40066 365 aa0.89□□□□□ -2.27
SLX4YLR135W PDS1P40316 373 aaPredicted RBP0.89□□□□□ -2.27
SLX4YLR135W ARP3P47117 449 aaKnown RBP0.89□□□□□ -2.27
SLX4YLR135W ERG25P53045 309 aa0.89□□□□□ -2.27
SLX4YLR135W NRK1P53915 240 aa0.89□□□□□ -2.27
SLX4YLR135W YMR315WQ04869 349 aaKnown RBP0.89□□□□□ -2.27
SLX4YLR135W FUS2Q05670 677 aa0.89□□□□□ -2.27
SLX4YLR135W YOL024WQ08172 172 aa0.89□□□□□ -2.27
SLX4YLR135W YOL160WQ08321 113 aa0.89□□□□□ -2.27
SLX4YLR135W ODC2Q99297 307 aa0.89□□□□□ -2.27
SLX4YLR135W YET1P35723 206 aa0.89□□□□□ -2.27
SLX4YLR135W SEC72P39742 193 aaKnown RBP0.89□□□□□ -2.27
SLX4YLR135W POG1P40473 351 aa0.89□□□□□ -2.27
SLX4YLR135W JAC1P53193 184 aa0.89□□□□□ -2.27
SLX4YLR135W HNT1Q04344 158 aaKnown RBP0.89□□□□□ -2.27
SLX4YLR135W DYN3Q04949 312 aa0.89□□□□□ -2.27
SLX4YLR135W NOC4Q06512 552 aaPredicted RBP0.89□□□□□ -2.27
SLX4YLR135W YLR031WQ07978 186 aa0.89□□□□□ -2.27
SLX4YLR135W BOL1Q3E793 110 aa0.89□□□□□ -2.27
SLX4YLR135W TRR1P29509 319 aaKnown RBP0.88□□□□□ -2.27
SLX4YLR135W KDX1P36005 433 aa0.88□□□□□ -2.27
SLX4YLR135W MAK5P38112 773 aaPredicted RBP0.88□□□□□ -2.27
SLX4YLR135W YHR022CP38763 256 aa0.88□□□□□ -2.27
SLX4YLR135W DSE2P38844 325 aa0.88□□□□□ -2.27
SLX4YLR135W AYR1P40471 297 aa0.88□□□□□ -2.27
SLX4YLR135W FMP32P43557 207 aa0.88□□□□□ -2.27
SLX4YLR135W YLR036CQ07986 203 aa0.88□□□□□ -2.27
SLX4YLR135W IGO2Q9P305 131 aa0.88□□□□□ -2.27
SLX4YLR135W YCR090CP25654 182 aaKnown RBP0.88□□□□□ -2.27
SLX4YLR135W MGT1P26188 188 aa0.88□□□□□ -2.27
SLX4YLR135W OPY1P38271 328 aa0.88□□□□□ -2.27
SLX4YLR135W YER134CP40081 178 aa0.88□□□□□ -2.27
SLX4YLR135W YNL217WP40152 326 aa0.88□□□□□ -2.27
SLX4YLR135W TDA4P47153 279 aa0.88□□□□□ -2.27
SLX4YLR135W YNR077CP53758 84 aa0.88□□□□□ -2.27
SLX4YLR135W CYT2Q00873 224 aa0.88□□□□□ -2.27
SLX4YLR135W NUP49Q02199 472 aa0.88□□□□□ -2.27
SLX4YLR135W GIM5Q04493 163 aa0.88□□□□□ -2.27
SLX4YLR135W ATG40Q99325 256 aa0.88□□□□□ -2.27
SLX4YLR135W BEM2P39960 2167 aaKnown RBP0.87□□□□□ -2.27
SLX4YLR135W PDR18P53756 1333 aa0.87□□□□□ -2.27
SLX4YLR135W CPA1P07258 411 aaKnown RBP0.87□□□□□ -2.27
SLX4YLR135W GCY1P14065 312 aaKnown RBP RIP-Chip data0.87□□□□□ -2.27not detected
SLX4YLR135W MDH2P22133 377 aa0.87□□□□□ -2.27
SLX4YLR135W ARO7P32178 256 aa0.87□□□□□ -2.27
SLX4YLR135W CLG1P35190 452 aa0.87□□□□□ -2.27
SLX4YLR135W PAN3P36102 679 aaPredicted RBP0.87□□□□□ -2.27
SLX4YLR135W AVT2P39981 480 aa0.87□□□□□ -2.27
SLX4YLR135W PEP8P40335 379 aa0.87□□□□□ -2.27
SLX4YLR135W SER2P42941 309 aa0.87□□□□□ -2.27
SLX4YLR135W TMA22P47089 198 aaPredicted RBP0.87□□□□□ -2.27
SLX4YLR135W ARO8P53090 500 aaKnown RBP0.87□□□□□ -2.27
SLX4YLR135W YLR460CP54007 376 aa0.87□□□□□ -2.27
SLX4YLR135W YDR274CP87283 123 aa0.87□□□□□ -2.27
SLX4YLR135W SNO1Q03144 224 aa0.87□□□□□ -2.27
SLX4YLR135W CMC2Q3E7A4 109 aa0.87□□□□□ -2.27
SLX4YLR135W FAS1P07149 2051 aaKnown RBP0.87□□□□□ -2.27
SLX4YLR135W YAR023CD6VPM8 179 aa0.87□□□□□ -2.27
SLX4YLR135W QCR6P00127 147 aa0.87□□□□□ -2.27
SLX4YLR135W PHO85P17157 305 aa0.87□□□□□ -2.27
SLX4YLR135W RAD51P25454 400 aa0.87□□□□□ -2.27
SLX4YLR135W TAH1P25638 111 aaPredicted RBP0.87□□□□□ -2.27
SLX4YLR135W FZF1P32805 299 aa0.87□□□□□ -2.27
SLX4YLR135W VPS51P36116 164 aa0.87□□□□□ -2.27
SLX4YLR135W YKR041WP36134 250 aa0.87□□□□□ -2.27
SLX4YLR135W AIM2P39721 246 aa0.87□□□□□ -2.27
SLX4YLR135W YEA4P40004 342 aa0.87□□□□□ -2.27
SLX4YLR135W YER034WP40022 185 aaKnown RBP0.87□□□□□ -2.27
SLX4YLR135W VTC1P40046 129 aaRIP-Chip data0.87□□□□□ -2.27not detected
SLX4YLR135W AGE2P40529 298 aa0.87□□□□□ -2.27
SLX4YLR135W YFR054CP43622 192 aa0.87□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms