RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W ATG5Q12380 294 aa3.43□□□□□ -1.86
SOF1YLL011W DFM1Q12743 341 aaKnown RBP3.43□□□□□ -1.86
SOF1YLL011W SIR2P06700 562 aa3.42□□□□□ -1.86
SOF1YLL011W SEC22P22214 214 aa3.42□□□□□ -1.86
SOF1YLL011W TCA17P32613 152 aa3.42□□□□□ -1.86
SOF1YLL011W HST4P53688 370 aa3.42□□□□□ -1.86
SOF1YLL011W DYN3Q04949 312 aa3.42□□□□□ -1.86
SOF1YLL011W ECM19Q06011 112 aa3.42□□□□□ -1.86
SOF1YLL011W YDL085C-AQ3E7B7 68 aaKnown RBP3.42□□□□□ -1.86
SOF1YLL011W TOR2P32600 2474 aaKnown RBP3.42□□□□□ -1.86
SOF1YLL011W EPT1P22140 391 aa3.41□□□□□ -1.86
SOF1YLL011W SCO1P23833 295 aa3.41□□□□□ -1.86
SOF1YLL011W RMD6P39975 231 aa3.41□□□□□ -1.86
SOF1YLL011W RRT13P40042 185 aa3.41□□□□□ -1.86
SOF1YLL011W SYS1P41544 203 aa3.41□□□□□ -1.86
SOF1YLL011W YGR042WP53227 271 aa3.41□□□□□ -1.86
SOF1YLL011W COG5P53951 403 aa3.41□□□□□ -1.86
SOF1YLL011W NOT5Q12514 560 aaPredicted RBP3.41□□□□□ -1.86
SOF1YLL011W YAL067W-AQ8TGK6 75 aa3.41□□□□□ -1.86
SOF1YLL011W CDC7P06243 507 aa3.41□□□□□ -1.86
SOF1YLL011W CMD1P06787 147 aaKnown RBP3.41□□□□□ -1.86
SOF1YLL011W YCR023CP25351 611 aa3.41□□□□□ -1.86
SOF1YLL011W PHO88P38264 188 aaPredicted RBP3.41□□□□□ -1.86
SOF1YLL011W DOG2P38773 246 aa3.41□□□□□ -1.86
SOF1YLL011W ASP1P38986 381 aaPredicted RBP3.41□□□□□ -1.86
SOF1YLL011W YER189WP40104 122 aa3.41□□□□□ -1.86
SOF1YLL011W RSM25P40496 264 aa3.41□□□□□ -1.86
SOF1YLL011W YIL054WP40524 105 aa3.41□□□□□ -1.86
SOF1YLL011W AGE2P40529 298 aa3.41□□□□□ -1.86
SOF1YLL011W MIC19P43594 170 aa3.41□□□□□ -1.86
SOF1YLL011W YGL204CP53089 101 aa3.41□□□□□ -1.86
SOF1YLL011W YGR050CP53231 118 aa3.41□□□□□ -1.86
SOF1YLL011W COS6P53344 381 aa3.41□□□□□ -1.86
SOF1YLL011W MPA43P53583 542 aaPredicted RBP3.41□□□□□ -1.86
SOF1YLL011W MAK3Q03503 176 aa3.41□□□□□ -1.86
SOF1YLL011W HNT1Q04344 158 aaKnown RBP3.41□□□□□ -1.86
SOF1YLL011W YOL019WQ08157 551 aa3.41□□□□□ -1.86
SOF1YLL011W SLD7Q08457 257 aa3.41□□□□□ -1.86
SOF1YLL011W YBL112CQ3E7Y4 105 aa3.41□□□□□ -1.86
SOF1YLL011W TOR1P35169 2470 aa3.4□□□□□ -1.86
SOF1YLL011W NUM1Q00402 2748 aa3.4□□□□□ -1.87
SOF1YLL011W SNF4P12904 322 aa3.4□□□□□ -1.87
SOF1YLL011W RPB9P27999 122 aa3.4□□□□□ -1.87
SOF1YLL011W UBC8P28263 218 aa3.4□□□□□ -1.87
SOF1YLL011W ERG24P32462 438 aaKnown RBP3.4□□□□□ -1.87
SOF1YLL011W MSA2P36157 363 aa3.4□□□□□ -1.87
SOF1YLL011W HMF1P40037 129 aaKnown RBP3.4□□□□□ -1.87
SOF1YLL011W BOR1P53838 576 aa3.4□□□□□ -1.87
SOF1YLL011W AIM34Q03673 198 aa3.4□□□□□ -1.87
SOF1YLL011W YMD8Q03697 442 aa3.4□□□□□ -1.87
SOF1YLL011W YML108WQ03759 105 aa3.4□□□□□ -1.87
SOF1YLL011W YMR321CQ04898 105 aa3.4□□□□□ -1.87
SOF1YLL011W SUE1Q06524 206 aa3.4□□□□□ -1.87
SOF1YLL011W YLR031WQ07978 186 aa3.4□□□□□ -1.87
SOF1YLL011W HTL1Q9URQ5 78 aa3.4□□□□□ -1.87
SOF1YLL011W SEC14P24280 304 aaKnown RBP3.39□□□□□ -1.87
SOF1YLL011W SWD3P38123 315 aa3.39□□□□□ -1.87
SOF1YLL011W GPI18P38211 433 aa3.39□□□□□ -1.87
SOF1YLL011W SLM6P38343 150 aa3.39□□□□□ -1.87
SOF1YLL011W TRR2P38816 342 aa3.39□□□□□ -1.87
SOF1YLL011W CYC2P38909 366 aa3.39□□□□□ -1.87
SOF1YLL011W FMP32P43557 207 aa3.39□□□□□ -1.87
SOF1YLL011W MOG1P47123 218 aa3.39□□□□□ -1.87
SOF1YLL011W PGU1P47180 361 aa3.39□□□□□ -1.87
SOF1YLL011W CAX4P53223 239 aa3.39□□□□□ -1.87
SOF1YLL011W HSK3P69852 69 aa3.39□□□□□ -1.87
SOF1YLL011W GAS3Q03655 524 aa3.39□□□□□ -1.87
SOF1YLL011W SHH4Q06236 168 aa3.39□□□□□ -1.87
SOF1YLL011W YPL264CQ08980 353 aa3.39□□□□□ -1.87
SOF1YLL011W TDA8Q6B2U8 126 aa3.39□□□□□ -1.87
SOF1YLL011W COX4P04037 155 aa3.38□□□□□ -1.87
SOF1YLL011W AHC2P25649 128 aa3.38□□□□□ -1.87
SOF1YLL011W BUB2P26448 306 aaPredicted RBP3.38□□□□□ -1.87
SOF1YLL011W UFD1P53044 361 aa3.38□□□□□ -1.87
SOF1YLL011W OSH6Q02201 448 aa3.38□□□□□ -1.87
SOF1YLL011W GRH1Q04410 372 aaKnown RBP3.38□□□□□ -1.87
SOF1YLL011W NIP7Q08962 181 aaKnown RBP3.38□□□□□ -1.87
SOF1YLL011W YDL211CQ12121 372 aa3.38□□□□□ -1.87
SOF1YLL011W PST1Q12355 444 aa3.38□□□□□ -1.87
SOF1YLL011W MHT1Q12525 324 aa3.38□□□□□ -1.87
SOF1YLL011W YLR462WO13556 202 aa3.37□□□□□ -1.87
SOF1YLL011W MBF1O14467 151 aaKnown RBP3.37□□□□□ -1.87
SOF1YLL011W DSF1P0CX08 502 aa3.37□□□□□ -1.87
SOF1YLL011W YNR073CP0CX09 502 aa3.37□□□□□ -1.87
SOF1YLL011W FCY2P17064 533 aa3.37□□□□□ -1.87
SOF1YLL011W MAG1P22134 296 aaKnown RBP3.37□□□□□ -1.87
SOF1YLL011W UPS2P35200 230 aa3.37□□□□□ -1.87
SOF1YLL011W FMP46P36141 133 aaKnown RBP3.37□□□□□ -1.87
SOF1YLL011W TEM1P38987 245 aa3.37□□□□□ -1.87
SOF1YLL011W AST2P39945 430 aaKnown RBP3.37□□□□□ -1.87
SOF1YLL011W YEL075CP39972 122 aa3.37□□□□□ -1.87
SOF1YLL011W IRC22P40006 225 aa3.37□□□□□ -1.87
SOF1YLL011W GLE2P40066 365 aa3.37□□□□□ -1.87
SOF1YLL011W YNL010WP53981 241 aaKnown RBP3.37□□□□□ -1.87
SOF1YLL011W ECM11Q04110 302 aa3.37□□□□□ -1.87
SOF1YLL011W YPL247CQ12523 523 aa3.37□□□□□ -1.87
SOF1YLL011W EFG1Q3E705 233 aaKnown RBP3.37□□□□□ -1.87
SOF1YLL011W YPR170W-BP0C5R9 85 aa3.36□□□□□ -1.87
SOF1YLL011W PRE7P23724 241 aaKnown RBP3.36□□□□□ -1.87
SOF1YLL011W ATG22P25568 528 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms