RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C MBF1O14467 151 aaKnown RBP1.48□□□□□ -2.17
UBP11YKR098C ATP15P21306 62 aa1.48□□□□□ -2.17
UBP11YKR098C MEI4P29467 408 aa1.48□□□□□ -2.17
UBP11YKR098C MRPL17P36528 281 aa1.48□□□□□ -2.17
UBP11YKR098C YHR180WP38868 163 aa1.48□□□□□ -2.17
UBP11YKR098C GLE2P40066 365 aa1.48□□□□□ -2.17
UBP11YKR098C ICE2P40499 491 aa1.48□□□□□ -2.17
UBP11YKR098C YLR036CQ07986 203 aa1.48□□□□□ -2.17
UBP11YKR098C RIO1Q12196 484 aaKnown RBP1.48□□□□□ -2.17
UBP11YKR098C TIM9O74700 87 aa1.48□□□□□ -2.17
UBP11YKR098C TRX3P25372 127 aa1.48□□□□□ -2.17
UBP11YKR098C YCR090CP25654 182 aaKnown RBP1.48□□□□□ -2.17
UBP11YKR098C VPS51P36116 164 aa1.48□□□□□ -2.17
UBP11YKR098C JAC1P53193 184 aa1.48□□□□□ -2.17
UBP11YKR098C YLR460CP54007 376 aa1.48□□□□□ -2.17
UBP11YKR098C ATO3Q12359 275 aa1.48□□□□□ -2.17
UBP11YKR098C YDL085C-AQ3E7B7 68 aaKnown RBP1.48□□□□□ -2.17
UBP11YKR098C SNF4P12904 322 aa1.47□□□□□ -2.17
UBP11YKR098C PET9P18239 318 aaKnown RBP1.47□□□□□ -2.17
UBP11YKR098C SRP14P38985 146 aa1.47□□□□□ -2.17
UBP11YKR098C PGD1P40356 397 aa1.47□□□□□ -2.17
UBP11YKR098C YNL140CP53910 189 aa1.47□□□□□ -2.17
UBP11YKR098C HNT1Q04344 158 aaKnown RBP1.47□□□□□ -2.17
UBP11YKR098C YMR315WQ04869 349 aaKnown RBP1.47□□□□□ -2.17
UBP11YKR098C EMC6Q12431 108 aa1.47□□□□□ -2.17
UBP11YKR098C MDH3P32419 343 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
UBP11YKR098C UTR5P32630 166 aa1.47□□□□□ -2.17
UBP11YKR098C CLG1P35190 452 aa1.47□□□□□ -2.17
UBP11YKR098C YOR062CP36025 268 aa1.47□□□□□ -2.17
UBP11YKR098C MAK5P38112 773 aaPredicted RBP1.47□□□□□ -2.17
UBP11YKR098C FMP23P38231 175 aa1.47□□□□□ -2.17
UBP11YKR098C YER121WP40076 114 aa1.47□□□□□ -2.17
UBP11YKR098C GVP36P40531 326 aaKnown RBP1.47□□□□□ -2.17
UBP11YKR098C SKI6P46948 246 aaPredicted RBP1.47□□□□□ -2.17
UBP11YKR098C ARO8P53090 500 aaKnown RBP1.47□□□□□ -2.17
UBP11YKR098C YGR219WP53307 113 aa1.47□□□□□ -2.17
UBP11YKR098C YNL247WP53852 767 aaKnown RBP1.47□□□□□ -2.17
UBP11YKR098C PRM15Q03262 622 aa1.47□□□□□ -2.17
UBP11YKR098C BRX1Q08235 291 aaKnown RBP1.47□□□□□ -2.17
UBP11YKR098C CKS1P20486 150 aaKnown RBP1.46□□□□□ -2.18
UBP11YKR098C DOC1P53068 250 aa1.46□□□□□ -2.18
UBP11YKR098C YNR062CP53748 327 aa1.46□□□□□ -2.18
UBP11YKR098C YDR274CP87283 123 aa1.46□□□□□ -2.18
UBP11YKR098C MRPS8Q03799 155 aa1.46□□□□□ -2.18
UBP11YKR098C MGT1P26188 188 aa1.45□□□□□ -2.18
UBP11YKR098C OCH1P31755 480 aa1.45□□□□□ -2.18
UBP11YKR098C ARO7P32178 256 aa1.45□□□□□ -2.18
UBP11YKR098C UMP1P38293 148 aa1.45□□□□□ -2.18
UBP11YKR098C YER076CP40049 302 aa1.45□□□□□ -2.18
UBP11YKR098C FMP32P43557 207 aa1.45□□□□□ -2.18
UBP11YKR098C CIS3P47001 227 aa1.45□□□□□ -2.18
UBP11YKR098C YJR111CP47148 283 aaKnown RBP1.45□□□□□ -2.18
UBP11YKR098C YLR031WQ07978 186 aa1.45□□□□□ -2.18
UBP11YKR098C DGA1Q08650 418 aa1.45□□□□□ -2.18
UBP11YKR098C YOR283WQ12040 230 aaKnown RBP1.45□□□□□ -2.18
UBP11YKR098C MRPS28P21771 286 aa1.45□□□□□ -2.18
UBP11YKR098C PEX4P29340 183 aa1.45□□□□□ -2.18
UBP11YKR098C ERV15P38312 142 aa1.45□□□□□ -2.18
UBP11YKR098C NVJ1P38881 321 aa1.45□□□□□ -2.18
UBP11YKR098C LSM4P40070 187 aaKnown RBP1.45□□□□□ -2.18
UBP11YKR098C YKE4P40544 346 aa1.45□□□□□ -2.18
UBP11YKR098C RPL33BP41056 107 aaKnown RBP1.45□□□□□ -2.18
UBP11YKR098C CGI121Q03705 181 aaKnown RBP1.45□□□□□ -2.18
UBP11YKR098C RPS24AP0CX31 135 aaKnown RBP1.44□□□□□ -2.18
UBP11YKR098C RPS24BP0CX32 135 aaKnown RBP1.44□□□□□ -2.18
UBP11YKR098C AHC2P25649 128 aa1.44□□□□□ -2.18
UBP11YKR098C SNC2P33328 115 aa1.44□□□□□ -2.18
UBP11YKR098C FES1P38260 290 aa1.44□□□□□ -2.18
UBP11YKR098C PHO88P38264 188 aaPredicted RBP1.44□□□□□ -2.18
UBP11YKR098C OPY1P38271 328 aa1.44□□□□□ -2.18
UBP11YKR098C AIM34Q03673 198 aa1.44□□□□□ -2.18
UBP11YKR098C SCL1P21243 252 aaKnown RBP1.44□□□□□ -2.18
UBP11YKR098C TIR3P40552 269 aa1.44□□□□□ -2.18
UBP11YKR098C SER2P42941 309 aa1.44□□□□□ -2.18
UBP11YKR098C EAF6P47128 113 aa1.44□□□□□ -2.18
UBP11YKR098C BOL2P53082 120 aa1.44□□□□□ -2.18
UBP11YKR098C YNR077CP53758 84 aa1.44□□□□□ -2.18
UBP11YKR098C PGA1P53896 198 aa1.44□□□□□ -2.18
UBP11YKR098C DAD3P69850 94 aa1.44□□□□□ -2.18
UBP11YKR098C SHH4Q06236 168 aa1.44□□□□□ -2.18
UBP11YKR098C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
UBP11YKR098C YLR050CQ12155 161 aaKnown RBP1.44□□□□□ -2.18
UBP11YKR098C ODC2Q99297 307 aa1.44□□□□□ -2.18
UBP11YKR098C RAS2P01120 322 aaKnown RBP1.43□□□□□ -2.18
UBP11YKR098C YET1P35723 206 aa1.43□□□□□ -2.18
UBP11YKR098C YBR285WP38354 144 aa1.43□□□□□ -2.18
UBP11YKR098C AIM2P39721 246 aa1.43□□□□□ -2.18
UBP11YKR098C YEA4P40004 342 aa1.43□□□□□ -2.18
UBP11YKR098C YJL027CP47063 138 aaPredicted RBP1.43□□□□□ -2.18
UBP11YKR098C TDA4P47153 279 aa1.43□□□□□ -2.18
UBP11YKR098C DAN1P47178 298 aa1.43□□□□□ -2.18
UBP11YKR098C RGM1Q00453 211 aa1.43□□□□□ -2.18
UBP11YKR098C FSF1Q12029 327 aaKnown RBP1.43□□□□□ -2.18
UBP11YKR098C MPD1Q12404 318 aaKnown RBP1.43□□□□□ -2.18
UBP11YKR098C CPA1P07258 411 aaKnown RBP1.42□□□□□ -2.18
UBP11YKR098C KDX1P36005 433 aa1.42□□□□□ -2.18
UBP11YKR098C AME1P38313 324 aa1.42□□□□□ -2.18
UBP11YKR098C GPI17Q04080 534 aa1.42□□□□□ -2.18
UBP11YKR098C YML100W-AQ8TGT0 57 aa1.42□□□□□ -2.18
UBP11YKR098C FAS1P07149 2051 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms