RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W LSM7P53905 115 aaKnown RBP0.99□□□□□ -2.25
VPS52YDR484W YHR214C-EQ8TGK0 99 aa0.99□□□□□ -2.25
VPS52YDR484W YDR157WA0A023PZE8 133 aa0.99□□□□□ -2.25
VPS52YDR484W YLR236CA0A023PZG4 107 aa0.99□□□□□ -2.25
VPS52YDR484W SIR2P06700 562 aa0.99□□□□□ -2.25
VPS52YDR484W CDC33P07260 213 aaKnown RBP0.99□□□□□ -2.25
VPS52YDR484W CKS1P20486 150 aaKnown RBP0.99□□□□□ -2.25
VPS52YDR484W MPA43P53583 542 aaPredicted RBP0.99□□□□□ -2.25
VPS52YDR484W COG5P53951 403 aa0.99□□□□□ -2.25
VPS52YDR484W YDR274CP87283 123 aa0.99□□□□□ -2.25
VPS52YDR484W CUE4Q04201 117 aaPredicted RBP0.99□□□□□ -2.25
VPS52YDR484W MDM32Q12171 622 aa0.99□□□□□ -2.25
VPS52YDR484W YIL177CP40434 1758 aa0.98□□□□□ -2.25
VPS52YDR484W YJL225CP40889 1758 aa0.98□□□□□ -2.25
VPS52YDR484W CPA1P07258 411 aaKnown RBP0.98□□□□□ -2.25
VPS52YDR484W CWC23P52868 283 aaPredicted RBP0.98□□□□□ -2.25
VPS52YDR484W PGA2P53903 129 aa0.98□□□□□ -2.25
VPS52YDR484W PET191Q02772 108 aa0.98□□□□□ -2.25
VPS52YDR484W BNA7Q04066 261 aa0.98□□□□□ -2.25
VPS52YDR484W YFR032C-BQ8TGU2 87 aa0.98□□□□□ -2.25
VPS52YDR484W MER1P16523 270 aa0.97□□□□□ -2.25
VPS52YDR484W IKI1P38874 309 aa0.97□□□□□ -2.25
VPS52YDR484W HMF1P40037 129 aaKnown RBP0.97□□□□□ -2.25
VPS52YDR484W YER076CP40049 302 aa0.97□□□□□ -2.25
VPS52YDR484W UBC7Q02159 165 aa0.97□□□□□ -2.25
VPS52YDR484W SEC11P15367 167 aa0.97□□□□□ -2.25
VPS52YDR484W ATP15P21306 62 aa0.97□□□□□ -2.25
VPS52YDR484W YCR087C-AP37263 153 aa0.97□□□□□ -2.25
VPS52YDR484W OPY1P38271 328 aa0.97□□□□□ -2.25
VPS52YDR484W RIO2P40160 425 aaKnown RBP0.97□□□□□ -2.25
VPS52YDR484W RNH1Q04740 348 aa0.97□□□□□ -2.25
VPS52YDR484W SPS18P32572 300 aa0.96□□□□□ -2.26
VPS52YDR484W HNT1Q04344 158 aaKnown RBP0.96□□□□□ -2.26
VPS52YDR484W YHR007C-AQ07074 71 aa0.96□□□□□ -2.26
VPS52YDR484W YNG1Q08465 219 aa0.96□□□□□ -2.26
VPS52YDR484W RAD28Q12021 506 aa0.96□□□□□ -2.26
VPS52YDR484W YNL146C-AQ3E7Z1 64 aa0.96□□□□□ -2.26
VPS52YDR484W MSB2P32334 1306 aa0.96□□□□□ -2.26
VPS52YDR484W IKI3Q06706 1349 aaKnown RBP0.96□□□□□ -2.26
VPS52YDR484W VAR1P02381 398 aa0.95□□□□□ -2.26
VPS52YDR484W RPL27AP0C2H6 136 aaKnown RBP0.95□□□□□ -2.26
VPS52YDR484W KDX1P36005 433 aa0.95□□□□□ -2.26
VPS52YDR484W ARG80P07249 177 aa0.95□□□□□ -2.26
VPS52YDR484W TAF14P35189 244 aa0.95□□□□□ -2.26
VPS52YDR484W ECM4P36156 370 aa0.95□□□□□ -2.26
VPS52YDR484W YER034WP40022 185 aaKnown RBP0.95□□□□□ -2.26
VPS52YDR484W RCE1Q03530 315 aa0.95□□□□□ -2.26
VPS52YDR484W YOL160WQ08321 113 aa0.95□□□□□ -2.26
VPS52YDR484W ODC2Q99297 307 aa0.95□□□□□ -2.26
VPS52YDR484W NTG1P31378 399 aa0.94□□□□□ -2.26
VPS52YDR484W YMR226CQ05016 267 aaKnown RBP0.94□□□□□ -2.26
VPS52YDR484W GIS3Q12418 502 aa0.94□□□□□ -2.26
VPS52YDR484W ACC1Q00955 2233 aaKnown RBP0.94□□□□□ -2.26
VPS52YDR484W HTB1P02293 131 aaKnown RBP0.93□□□□□ -2.26
VPS52YDR484W HTB2P02294 131 aa0.93□□□□□ -2.26
VPS52YDR484W RPB4P20433 221 aaPredicted RBP0.93□□□□□ -2.26
VPS52YDR484W YCR090CP25654 182 aaKnown RBP0.93□□□□□ -2.26
VPS52YDR484W RFA3P26755 122 aaKnown RBP0.93□□□□□ -2.26
VPS52YDR484W VMA22P38784 181 aa0.93□□□□□ -2.26
VPS52YDR484W EDC3P39998 551 aaKnown RBP0.93□□□□□ -2.26
VPS52YDR484W AIM25P47140 327 aa0.93□□□□□ -2.26
VPS52YDR484W ARO8P53090 500 aaKnown RBP0.93□□□□□ -2.26
VPS52YDR484W FUS2Q05670 677 aa0.93□□□□□ -2.26
VPS52YDR484W TVP23P38962 199 aa0.93□□□□□ -2.26
VPS52YDR484W AIM2P39721 246 aa0.93□□□□□ -2.26
VPS52YDR484W FLX1P40464 311 aa0.93□□□□□ -2.26
VPS52YDR484W ERG10P41338 398 aaKnown RBP0.93□□□□□ -2.26
VPS52YDR484W YPR174CQ06616 221 aaPredicted RBP0.93□□□□□ -2.26
VPS52YDR484W SPO13P23624 291 aa0.92□□□□□ -2.26
VPS52YDR484W CNB1P25296 175 aa0.92□□□□□ -2.26
VPS52YDR484W OCH1P31755 480 aa0.92□□□□□ -2.26
VPS52YDR484W PAN3P36102 679 aaPredicted RBP0.92□□□□□ -2.26
VPS52YDR484W YAE1P47118 141 aaPredicted RBP0.92□□□□□ -2.26
VPS52YDR484W GET1P53192 235 aa0.92□□□□□ -2.26
VPS52YDR484W GGA1Q06336 557 aa0.92□□□□□ -2.26
VPS52YDR484W DGA1Q08650 418 aa0.92□□□□□ -2.26
VPS52YDR484W YRA1Q12159 226 aaKnown RBP0.92□□□□□ -2.26
VPS52YDR484W FAS1P07149 2051 aaKnown RBP0.92□□□□□ -2.26
VPS52YDR484W POR1P04840 283 aaKnown RBP0.91□□□□□ -2.26
VPS52YDR484W CDC36P06100 191 aaPredicted RBP0.91□□□□□ -2.26
VPS52YDR484W MPC3P53311 146 aa0.91□□□□□ -2.26
VPS52YDR484W TIM11P81449 96 aaPredicted RBP0.91□□□□□ -2.26
VPS52YDR484W CWC27Q02770 301 aa0.91□□□□□ -2.26
VPS52YDR484W MRPS17Q03246 237 aaPredicted RBP0.91□□□□□ -2.26
VPS52YDR484W DYN3Q04949 312 aa0.91□□□□□ -2.26
VPS52YDR484W MDM35O60200 86 aa0.91□□□□□ -2.26
VPS52YDR484W YPL073CP40323 161 aa0.91□□□□□ -2.26
VPS52YDR484W RFC4P40339 323 aaKnown RBP0.91□□□□□ -2.26
VPS52YDR484W MBF1O14467 151 aaKnown RBP0.9□□□□□ -2.27
VPS52YDR484W CBF1P17106 351 aa0.9□□□□□ -2.27
VPS52YDR484W YPK2P18961 677 aa0.9□□□□□ -2.27
VPS52YDR484W ASF2P32448 525 aaPredicted RBP0.9□□□□□ -2.27
VPS52YDR484W YHL042WP38729 150 aa0.9□□□□□ -2.27
VPS52YDR484W YEA4P40004 342 aa0.9□□□□□ -2.27
VPS52YDR484W SKI6P46948 246 aaPredicted RBP0.9□□□□□ -2.27
VPS52YDR484W YER134CP40081 178 aa0.89□□□□□ -2.27
VPS52YDR484W SER2P42941 309 aa0.89□□□□□ -2.27
VPS52YDR484W MMS2P53152 137 aa0.89□□□□□ -2.27
VPS52YDR484W YNL247WP53852 767 aaKnown RBP0.89□□□□□ -2.27
VPS52YDR484W YMR295CQ03559 197 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms