RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-DYDR034C-D UTP30P36144 274 aaKnown RBP2.34□□□□□ -2.03
YDR034C-DYDR034C-D SKG1P36169 355 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D YJL028WP47062 111 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D YJR111CP47148 283 aaKnown RBP2.34□□□□□ -2.03
YDR034C-DYDR034C-D RSM10Q03201 203 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D YMR320WQ04897 101 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D YPS3Q12303 508 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D SMT3Q12306 101 aaKnown RBP2.34□□□□□ -2.03
YDR034C-DYDR034C-D ERG2P32352 222 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D TKL2P33315 681 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D CYC2P38909 366 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D PGD1P40356 397 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D YAE1P47118 141 aaPredicted RBP2.34□□□□□ -2.03
YDR034C-DYDR034C-D SWP1Q02795 286 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D YMR230W-AQ3E7B5 62 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D Q0144Q9ZZW2 109 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D ECM5Q03214 1411 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D POP4P38336 279 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D RPF1P38805 295 aaKnown RBP2.34□□□□□ -2.03
YDR034C-DYDR034C-D MDM34P53083 459 aa2.34□□□□□ -2.03
YDR034C-DYDR034C-D HNT1Q04344 158 aaKnown RBP2.34□□□□□ -2.03
YDR034C-DYDR034C-D PTC1P35182 281 aa2.34□□□□□ -2.04
YDR034C-DYDR034C-D TRS20P38334 175 aa2.34□□□□□ -2.04
YDR034C-DYDR034C-D GGC1P38988 300 aa2.34□□□□□ -2.04
YDR034C-DYDR034C-D NSE4P43124 402 aa2.34□□□□□ -2.04
YDR034C-DYDR034C-D GOT1Q03554 138 aa2.34□□□□□ -2.04
YDR034C-DYDR034C-D GRH1Q04410 372 aaKnown RBP2.34□□□□□ -2.04
YDR034C-DYDR034C-D MRX8Q05473 314 aa2.34□□□□□ -2.04
YDR034C-DYDR034C-D UBI4P0CG63 381 aaKnown RBP2.33□□□□□ -2.04
YDR034C-DYDR034C-D COX10P21592 462 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D YPT53P36019 220 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D DOG2P38773 246 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D YGR039WP53225 103 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D SEN15Q04675 128 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D FUN14P18411 198 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D SEC22P22214 214 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D AAT2P23542 418 aaKnown RBP2.33□□□□□ -2.04
YDR034C-DYDR034C-D IPI1P38803 334 aaPredicted RBP2.33□□□□□ -2.04
YDR034C-DYDR034C-D TRR2P38816 342 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D PTH1P38876 190 aaKnown RBP2.33□□□□□ -2.04
YDR034C-DYDR034C-D YER189WP40104 122 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D GPI17Q04080 534 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D LDB18Q07887 179 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D IRC25Q07951 179 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D YLR036CQ07986 203 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D PRR2Q12310 699 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D YDL085C-AQ3E7B7 68 aaKnown RBP2.33□□□□□ -2.04
YDR034C-DYDR034C-D YAL067W-AQ8TGK6 75 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D NUP157P40064 1391 aaKnown RBP2.33□□□□□ -2.04
YDR034C-DYDR034C-D MSA2P36157 363 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D MRPL27P36526 146 aaPredicted RBP2.33□□□□□ -2.04
YDR034C-DYDR034C-D SSH1P38353 490 aaKnown RBP2.33□□□□□ -2.04
YDR034C-DYDR034C-D RPL21AQ02753 160 aaKnown RBP2.33□□□□□ -2.04
YDR034C-DYDR034C-D VPS28Q02767 242 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D YDR249CQ03787 373 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D ATG39Q06159 398 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D PTM1P32857 523 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D CTR2P38865 189 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D TIM8P57744 87 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D TSA2Q04120 196 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D INM2Q05533 292 aa2.33□□□□□ -2.04
YDR034C-DYDR034C-D SGA1P08019 549 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D SPS2P08459 502 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D PRE7P23724 241 aaKnown RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D TRX3P25372 127 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D YPT31P38555 223 aaKnown RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D RPS28BP0C0X0 67 aaKnown RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D ARO2P28777 376 aaKnown RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D SFK1P35735 353 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D YDR115WQ04598 105 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D RPS28AQ3E7X9 67 aaPredicted RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D YFR032C-BQ8TGU2 87 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D PRE1P22141 198 aaKnown RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D APJ1P53940 528 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D LPP1Q04396 274 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D YOL029CQ08187 201 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D MHT1Q12525 324 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D YKL102CP34249 101 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D YGP1P38616 354 aaKnown RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D YGL262WP53054 175 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D PGA1P53896 198 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D YLR462WO13556 202 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D YBL059WP34224 193 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D TRM7P38238 310 aaKnown RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D CSH1P38287 376 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D YEL075CP39972 122 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D YIR035CP40579 254 aa2.32□□□□□ -2.04
YDR034C-DYDR034C-D SKI6P46948 246 aaPredicted RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D GPI14P47088 403 aaKnown RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D HPT1Q04178 221 aaKnown RBP2.32□□□□□ -2.04
YDR034C-DYDR034C-D TCB3Q03640 1545 aaKnown RBP2.31□□□□□ -2.04
YDR034C-DYDR034C-D SWT21P53873 357 aaPredicted RBP2.31□□□□□ -2.04
YDR034C-DYDR034C-D YMR317WQ04893 1140 aa2.31□□□□□ -2.04
YDR034C-DYDR034C-D SHH4Q06236 168 aa2.31□□□□□ -2.04
YDR034C-DYDR034C-D YOL019WQ08157 551 aa2.31□□□□□ -2.04
YDR034C-DYDR034C-D BUD23P25627 275 aaPredicted RBP2.31□□□□□ -2.04
YDR034C-DYDR034C-D YHR130CP38834 111 aa2.31□□□□□ -2.04
YDR034C-DYDR034C-D HMF1P40037 129 aaKnown RBP2.31□□□□□ -2.04
YDR034C-DYDR034C-D YNL200CP40165 246 aaKnown RBP2.31□□□□□ -2.04
YDR034C-DYDR034C-D SMD3P43321 101 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms