RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W CPA1P07258 411 aaKnown RBP1.46□□□□□ -2.18
SHS1YDL225W MATALPHA2P0CY08 210 aa1.46□□□□□ -2.18
SHS1YDL225W HMLALPHA2P0CY09 210 aa1.46□□□□□ -2.18
SHS1YDL225W YKR045CP36138 183 aa1.46□□□□□ -2.18
SHS1YDL225W RFC4P40339 323 aaKnown RBP1.46□□□□□ -2.18
SHS1YDL225W YNG1Q08465 219 aa1.46□□□□□ -2.18
SHS1YDL225W PDR18P53756 1333 aa1.46□□□□□ -2.18
SHS1YDL225W ATP15P21306 62 aa1.45□□□□□ -2.18
SHS1YDL225W AIM25P47140 327 aa1.45□□□□□ -2.18
SHS1YDL225W SAY1P53324 424 aa1.45□□□□□ -2.18
SHS1YDL225W YLR162WQ06235 118 aa1.45□□□□□ -2.18
SHS1YDL225W ADF1Q2V2Q1 113 aa1.45□□□□□ -2.18
SHS1YDL225W YCL012CQ8J0M4 134 aa1.45□□□□□ -2.18
SHS1YDL225W YIL177CP40434 1758 aa1.45□□□□□ -2.18
SHS1YDL225W YJL225CP40889 1758 aa1.45□□□□□ -2.18
SHS1YDL225W MAG1P22134 296 aaKnown RBP1.45□□□□□ -2.18
SHS1YDL225W YGL010WP25338 174 aa1.45□□□□□ -2.18
SHS1YDL225W YBR285WP38354 144 aa1.45□□□□□ -2.18
SHS1YDL225W HMF1P40037 129 aaKnown RBP1.45□□□□□ -2.18
SHS1YDL225W CGR1P53188 120 aa1.45□□□□□ -2.18
SHS1YDL225W MRPS17Q03246 237 aaPredicted RBP1.45□□□□□ -2.18
SHS1YDL225W GRX3Q03835 250 aa1.45□□□□□ -2.18
SHS1YDL225W MET5P47169 1442 aa1.44□□□□□ -2.18
SHS1YDL225W YBR209WP38311 105 aa1.44□□□□□ -2.18
SHS1YDL225W GLE2P40066 365 aa1.44□□□□□ -2.18
SHS1YDL225W UBR2Q07963 1872 aa1.43□□□□□ -2.18
SHS1YDL225W CKS1P20486 150 aaKnown RBP1.43□□□□□ -2.18
SHS1YDL225W TMA19P35691 167 aaKnown RBP1.43□□□□□ -2.18
SHS1YDL225W YBR220CP38318 560 aa1.43□□□□□ -2.18
SHS1YDL225W GGA1Q06336 557 aa1.43□□□□□ -2.18
SHS1YDL225W ANT1Q06497 328 aa1.43□□□□□ -2.18
SHS1YDL225W ABP140Q08641 628 aaKnown RBP1.43□□□□□ -2.18
SHS1YDL225W GET4Q12125 312 aa1.43□□□□□ -2.18
SHS1YDL225W IKI3Q06706 1349 aaKnown RBP1.43□□□□□ -2.18
SHS1YDL225W JIP3O13555 125 aa1.42□□□□□ -2.18
SHS1YDL225W RPL2AP0CX45 254 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W RPL2BP0CX46 254 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W TFC1P32367 649 aa1.42□□□□□ -2.18
SHS1YDL225W SHE2P36068 246 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
SHS1YDL225W ERG10P41338 398 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W GET1P53192 235 aa1.42□□□□□ -2.18
SHS1YDL225W NOP19P53317 196 aaPredicted RBP1.42□□□□□ -2.18
SHS1YDL225W POP3P53833 195 aaPredicted RBP1.42□□□□□ -2.18
SHS1YDL225W ATG40Q99325 256 aa1.42□□□□□ -2.18
SHS1YDL225W FAS1P07149 2051 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W YLR236CA0A023PZG4 107 aa1.42□□□□□ -2.18
SHS1YDL225W SIR2P06700 562 aa1.42□□□□□ -2.18
SHS1YDL225W RPL13BP40212 199 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W KNH1P50112 268 aa1.42□□□□□ -2.18
SHS1YDL225W MMS2P53152 137 aa1.42□□□□□ -2.18
SHS1YDL225W HNT1Q04344 158 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W RPL13AQ12690 199 aaPredicted RBP1.42□□□□□ -2.18
SHS1YDL225W RPL27AP0C2H6 136 aaKnown RBP1.41□□□□□ -2.18
SHS1YDL225W CNB1P25296 175 aa1.41□□□□□ -2.18
SHS1YDL225W UPS2P35200 230 aa1.41□□□□□ -2.18
SHS1YDL225W ERJ5P43613 295 aaPredicted RBP1.41□□□□□ -2.18
SHS1YDL225W QCR7P00128 127 aa1.4□□□□□ -2.19
SHS1YDL225W MRS1P07266 363 aa1.4□□□□□ -2.19
SHS1YDL225W QCR8P08525 94 aa1.4□□□□□ -2.19
SHS1YDL225W FPR1P20081 114 aaKnown RBP1.4□□□□□ -2.19
SHS1YDL225W ASF2P32448 525 aaPredicted RBP1.4□□□□□ -2.19
SHS1YDL225W KDX1P36005 433 aa1.4□□□□□ -2.19
SHS1YDL225W NUP49Q02199 472 aa1.4□□□□□ -2.19
SHS1YDL225W GPA2P10823 449 aa1.39□□□□□ -2.19
SHS1YDL225W RAD28Q12021 506 aa1.39□□□□□ -2.19
SHS1YDL225W ACC1Q00955 2233 aaKnown RBP1.39□□□□□ -2.19
SHS1YDL225W MBF1O14467 151 aaKnown RBP1.39□□□□□ -2.19
SHS1YDL225W FUS2Q05670 677 aa1.39□□□□□ -2.19
SHS1YDL225W ODC2Q99297 307 aa1.39□□□□□ -2.19
SHS1YDL225W RAD9P14737 1309 aa1.38□□□□□ -2.19
SHS1YDL225W POR1P04840 283 aaKnown RBP1.38□□□□□ -2.19
SHS1YDL225W SEC11P15367 167 aa1.38□□□□□ -2.19
SHS1YDL225W YCR090CP25654 182 aaKnown RBP1.38□□□□□ -2.19
SHS1YDL225W OCH1P31755 480 aa1.38□□□□□ -2.19
SHS1YDL225W OPY1P38271 328 aa1.38□□□□□ -2.19
SHS1YDL225W VMA22P38784 181 aa1.38□□□□□ -2.19
SHS1YDL225W MPC3P53311 146 aa1.38□□□□□ -2.19
SHS1YDL225W CUE4Q04201 117 aaPredicted RBP1.38□□□□□ -2.19
SHS1YDL225W TVP23P38962 199 aa1.37□□□□□ -2.19
SHS1YDL225W ARP3P47117 449 aaKnown RBP1.37□□□□□ -2.19
SHS1YDL225W MZM1Q03429 123 aaPredicted RBP1.37□□□□□ -2.19
SHS1YDL225W YDL180WQ12301 547 aa1.37□□□□□ -2.19
SHS1YDL225W YPK2P18961 677 aa1.36□□□□□ -2.19
SHS1YDL225W SPO13P23624 291 aa1.36□□□□□ -2.19
SHS1YDL225W PAN3P36102 679 aaPredicted RBP1.36□□□□□ -2.19
SHS1YDL225W AIM2P39721 246 aa1.36□□□□□ -2.19
SHS1YDL225W YEA4P40004 342 aa1.36□□□□□ -2.19
SHS1YDL225W DGA1Q08650 418 aa1.36□□□□□ -2.19
SHS1YDL225W RIO1Q12196 484 aaKnown RBP1.36□□□□□ -2.19
SHS1YDL225W IGO2Q9P305 131 aa1.36□□□□□ -2.19
SHS1YDL225W SER2P42941 309 aa1.35□□□□□ -2.19
SHS1YDL225W ARO80Q04052 950 aa1.35□□□□□ -2.19
SHS1YDL225W APA2P22108 325 aa1.35□□□□□ -2.19
SHS1YDL225W YER034WP40022 185 aaKnown RBP1.35□□□□□ -2.19
SHS1YDL225W SKI6P46948 246 aaPredicted RBP1.35□□□□□ -2.19
SHS1YDL225W YNL184CP53876 108 aa1.35□□□□□ -2.19
SHS1YDL225W YMR099CQ03161 297 aaKnown RBP1.35□□□□□ -2.19
SHS1YDL225W YOL014WQ08110 124 aa1.35□□□□□ -2.19
SHS1YDL225W TVP38P36164 337 aa1.34□□□□□ -2.19
SHS1YDL225W PDS1P40316 373 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 84.1 ms