RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W YHL026CP38740 315 aa1.45□□□□□ -2.18
CDC50YCR094W MED6P38782 295 aa1.45□□□□□ -2.18
CDC50YCR094W SKI6P46948 246 aaPredicted RBP1.45□□□□□ -2.18
CDC50YCR094W YJL144WP47009 104 aa1.45□□□□□ -2.18
CDC50YCR094W SNX4P47057 423 aa1.45□□□□□ -2.18
CDC50YCR094W YJR111CP47148 283 aaKnown RBP1.45□□□□□ -2.18
CDC50YCR094W PRM15Q03262 622 aa1.45□□□□□ -2.18
CDC50YCR094W YLR036CQ07986 203 aa1.45□□□□□ -2.18
CDC50YCR094W BRX1Q08235 291 aaKnown RBP1.45□□□□□ -2.18
CDC50YCR094W MSW1P04803 379 aa1.44□□□□□ -2.18
CDC50YCR094W SNF4P12904 322 aa1.44□□□□□ -2.18
CDC50YCR094W BET1P22804 142 aa1.44□□□□□ -2.18
CDC50YCR094W TRX3P25372 127 aa1.44□□□□□ -2.18
CDC50YCR094W MEI4P29467 408 aa1.44□□□□□ -2.18
CDC50YCR094W OCH1P31755 480 aa1.44□□□□□ -2.18
CDC50YCR094W UBC6P33296 250 aaPredicted RBP1.44□□□□□ -2.18
CDC50YCR094W MRPL17P36528 281 aa1.44□□□□□ -2.18
CDC50YCR094W NVJ1P38881 321 aa1.44□□□□□ -2.18
CDC50YCR094W GLE2P40066 365 aa1.44□□□□□ -2.18
CDC50YCR094W MNN5P46982 586 aa1.44□□□□□ -2.18
CDC50YCR094W ARO8P53090 500 aaKnown RBP1.44□□□□□ -2.18
CDC50YCR094W EFM5P53200 248 aaKnown RBP1.44□□□□□ -2.18
CDC50YCR094W SLM2P53955 656 aa1.44□□□□□ -2.18
CDC50YCR094W NEJ1Q06148 342 aa1.44□□□□□ -2.18
CDC50YCR094W RDS3Q06835 107 aaPredicted RBP1.44□□□□□ -2.18
CDC50YCR094W HRT1Q08273 121 aa1.44□□□□□ -2.18
CDC50YCR094W RIO1Q12196 484 aaKnown RBP1.44□□□□□ -2.18
CDC50YCR094W YDL085C-AQ3E7B7 68 aaKnown RBP1.44□□□□□ -2.18
CDC50YCR094W TIM9O74700 87 aa1.43□□□□□ -2.18
CDC50YCR094W URA5P13298 226 aaKnown RBP1.43□□□□□ -2.18
CDC50YCR094W MRPS28P21771 286 aa1.43□□□□□ -2.18
CDC50YCR094W AHC2P25649 128 aa1.43□□□□□ -2.18
CDC50YCR094W MGT1P26188 188 aa1.43□□□□□ -2.18
CDC50YCR094W OPY1P38271 328 aa1.43□□□□□ -2.18
CDC50YCR094W LSM4P40070 187 aaKnown RBP1.43□□□□□ -2.18
CDC50YCR094W DSK2P48510 373 aa1.43□□□□□ -2.18
CDC50YCR094W AIF1P52923 378 aa1.43□□□□□ -2.18
CDC50YCR094W DOC1P53068 250 aa1.43□□□□□ -2.18
CDC50YCR094W COS6P53344 381 aa1.43□□□□□ -2.18
CDC50YCR094W HSK3P69852 69 aa1.43□□□□□ -2.18
CDC50YCR094W YLR050CQ12155 161 aaKnown RBP1.43□□□□□ -2.18
CDC50YCR094W TSC3Q3E790 80 aa1.43□□□□□ -2.18
CDC50YCR094W VMA11P32842 164 aa1.42□□□□□ -2.18
CDC50YCR094W CLB6P32943 380 aa1.42□□□□□ -2.18
CDC50YCR094W SKG1P36169 355 aa1.42□□□□□ -2.18
CDC50YCR094W AME1P38313 324 aa1.42□□□□□ -2.18
CDC50YCR094W PGD1P40356 397 aa1.42□□□□□ -2.18
CDC50YCR094W FMP32P43557 207 aa1.42□□□□□ -2.18
CDC50YCR094W SOL1P50278 321 aa1.42□□□□□ -2.18
CDC50YCR094W YNR062CP53748 327 aa1.42□□□□□ -2.18
CDC50YCR094W PGA1P53896 198 aa1.42□□□□□ -2.18
CDC50YCR094W GPI17Q04080 534 aa1.42□□□□□ -2.18
CDC50YCR094W HNT1Q04344 158 aaKnown RBP1.42□□□□□ -2.18
CDC50YCR094W NAT3Q06504 195 aa1.42□□□□□ -2.18
CDC50YCR094W YPR096CO13587 100 aa1.41□□□□□ -2.18
CDC50YCR094W YKL102CP34249 101 aa1.41□□□□□ -2.18
CDC50YCR094W YOR062CP36025 268 aa1.41□□□□□ -2.18
CDC50YCR094W YEA4P40004 342 aa1.41□□□□□ -2.18
CDC50YCR094W GVP36P40531 326 aaKnown RBP1.41□□□□□ -2.18
CDC50YCR094W SER2P42941 309 aa1.41□□□□□ -2.18
CDC50YCR094W YJL027CP47063 138 aaPredicted RBP1.41□□□□□ -2.18
CDC50YCR094W MPC3P53311 146 aa1.41□□□□□ -2.18
CDC50YCR094W NUP49Q02199 472 aa1.41□□□□□ -2.18
CDC50YCR094W MIX17Q03667 156 aa1.41□□□□□ -2.18
CDC50YCR094W AIM34Q03673 198 aa1.41□□□□□ -2.18
CDC50YCR094W HPT1Q04178 221 aaKnown RBP1.41□□□□□ -2.18
CDC50YCR094W SHH4Q06236 168 aa1.41□□□□□ -2.18
CDC50YCR094W SUE1Q06524 206 aa1.41□□□□□ -2.18
CDC50YCR094W DGA1Q08650 418 aa1.41□□□□□ -2.18
CDC50YCR094W PDR18P53756 1333 aa1.4□□□□□ -2.18
CDC50YCR094W RAS2P01120 322 aaKnown RBP1.4□□□□□ -2.19
CDC50YCR094W QCR2P07257 368 aa1.4□□□□□ -2.19
CDC50YCR094W RPS24AP0CX31 135 aaKnown RBP1.4□□□□□ -2.19
CDC50YCR094W RPS24BP0CX32 135 aaKnown RBP1.4□□□□□ -2.19
CDC50YCR094W CKS1P20486 150 aaKnown RBP1.4□□□□□ -2.19
CDC50YCR094W MDH3P32419 343 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
CDC50YCR094W PAN3P36102 679 aaPredicted RBP1.4□□□□□ -2.19
CDC50YCR094W UMP1P38293 148 aa1.4□□□□□ -2.19
CDC50YCR094W YFL019CP43576 117 aa1.4□□□□□ -2.19
CDC50YCR094W TDA4P47153 279 aa1.4□□□□□ -2.19
CDC50YCR094W BOL2P53082 120 aa1.4□□□□□ -2.19
CDC50YCR094W YGR219WP53307 113 aa1.4□□□□□ -2.19
CDC50YCR094W YNR077CP53758 84 aa1.4□□□□□ -2.19
CDC50YCR094W YDR274CP87283 123 aa1.4□□□□□ -2.19
CDC50YCR094W MRPS8Q03799 155 aa1.4□□□□□ -2.19
CDC50YCR094W YLR031WQ07978 186 aa1.4□□□□□ -2.19
CDC50YCR094W NSL1Q12143 216 aa1.4□□□□□ -2.19
CDC50YCR094W MPD1Q12404 318 aaKnown RBP1.4□□□□□ -2.19
CDC50YCR094W EMC6Q12431 108 aa1.4□□□□□ -2.19
CDC50YCR094W MHT1Q12525 324 aa1.4□□□□□ -2.19
CDC50YCR094W ODC2Q99297 307 aa1.4□□□□□ -2.19
CDC50YCR094W YAR023CD6VPM8 179 aa1.39□□□□□ -2.19
CDC50YCR094W SCL1P21243 252 aaKnown RBP1.39□□□□□ -2.19
CDC50YCR094W YCR023CP25351 611 aa1.39□□□□□ -2.19
CDC50YCR094W KDX1P36005 433 aa1.39□□□□□ -2.19
CDC50YCR094W DER1P38307 211 aa1.39□□□□□ -2.19
CDC50YCR094W EDC3P39998 551 aaKnown RBP1.39□□□□□ -2.19
CDC50YCR094W VTC1P40046 129 aaRIP-Chip data1.39□□□□□ -2.19not detected
CDC50YCR094W RPL33BP41056 107 aaKnown RBP1.39□□□□□ -2.19
CDC50YCR094W TMA22P47089 198 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms