RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	PDR17	P53844	350 aa		2.71	□□□□□ -1.98
YPK3	YBR028C	DAD3	P69850	94 aa		2.71	□□□□□ -1.98
YPK3	YBR028C	YNG1	Q08465	219 aa		2.71	□□□□□ -1.98
YPK3	YBR028C	YHR086W-A	Q3E746	53 aa		2.71	□□□□□ -1.98
YPK3	YBR028C	SCL1	P21243	252 aa	Known RBP	2.7	□□□□□ -1.98
YPK3	YBR028C	PEX4	P29340	183 aa		2.7	□□□□□ -1.98
YPK3	YBR028C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
YPK3	YBR028C	CIN5	P40917	295 aa		2.7	□□□□□ -1.98
YPK3	YBR028C	YFH7	P43591	353 aa		2.7	□□□□□ -1.98
YPK3	YBR028C	NQM1	P53228	333 aa	Predicted RBP	2.7	□□□□□ -1.98
YPK3	YBR028C	NRK1	P53915	240 aa		2.7	□□□□□ -1.98
YPK3	YBR028C	SEC4	P07560	215 aa	Known RBP	2.7	□□□□□ -1.98
YPK3	YBR028C	SPS18	P32572	300 aa		2.7	□□□□□ -1.98
YPK3	YBR028C	YGR219W	P53307	113 aa		2.7	□□□□□ -1.98
YPK3	YBR028C	PET191	Q02772	108 aa		2.7	□□□□□ -1.98
YPK3	YBR028C	SPG3	Q04398	127 aa	Predicted RBP	2.7	□□□□□ -1.98
YPK3	YBR028C	NOC4	Q06512	552 aa	Predicted RBP	2.7	□□□□□ -1.98
YPK3	YBR028C	TDA8	Q6B2U8	126 aa		2.7	□□□□□ -1.98
YPK3	YBR028C	ATG22	P25568	528 aa		2.69	□□□□□ -1.98
YPK3	YBR028C	POP4	P38336	279 aa		2.69	□□□□□ -1.98
YPK3	YBR028C	CIS3	P47001	227 aa		2.69	□□□□□ -1.98
YPK3	YBR028C	NUP49	Q02199	472 aa		2.69	□□□□□ -1.98
YPK3	YBR028C	YLR053C	Q12026	108 aa		2.69	□□□□□ -1.98
YPK3	YBR028C	NSL1	Q12143	216 aa		2.69	□□□□□ -1.98
YPK3	YBR028C	YLR156W	P0CE96	114 aa		2.68	□□□□□ -1.98
YPK3	YBR028C	YLR159W	P0CE97	114 aa		2.68	□□□□□ -1.98
YPK3	YBR028C	YLR161W	P0CE98	114 aa		2.68	□□□□□ -1.98
YPK3	YBR028C	PET54	P10834	293 aa		2.68	□□□□□ -1.98
YPK3	YBR028C	GCN3	P14741	305 aa		2.68	□□□□□ -1.98
YPK3	YBR028C	CYC2	P38909	366 aa		2.68	□□□□□ -1.98
YPK3	YBR028C	GAS3	Q03655	524 aa		2.68	□□□□□ -1.98
YPK3	YBR028C	SPC24	Q04477	213 aa		2.68	□□□□□ -1.98
YPK3	YBR028C	GRX8	Q05926	109 aa		2.68	□□□□□ -1.98
YPK3	YBR028C	YLR036C	Q07986	203 aa		2.68	□□□□□ -1.98
YPK3	YBR028C	PHO88	P38264	188 aa	Predicted RBP	2.67	□□□□□ -1.98
YPK3	YBR028C	VMA10	P48836	114 aa	Known RBP	2.67	□□□□□ -1.98
YPK3	YBR028C	ARO80	Q04052	950 aa		2.67	□□□□□ -1.98
YPK3	YBR028C	YLR031W	Q07978	186 aa		2.67	□□□□□ -1.98
YPK3	YBR028C	RPS24A	P0CX31	135 aa	Known RBP	2.66	□□□□□ -1.98
YPK3	YBR028C	RPS24B	P0CX32	135 aa	Known RBP	2.66	□□□□□ -1.98
YPK3	YBR028C	TRX3	P25372	127 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	TAH1	P25638	111 aa	Predicted RBP	2.66	□□□□□ -1.98
YPK3	YBR028C	MGT1	P26188	188 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	SEC17	P32602	292 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	UPS2	P35200	230 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	MRPL28	P36527	147 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	EDC3	P39998	551 aa	Known RBP	2.66	□□□□□ -1.98
YPK3	YBR028C	AIF1	P52923	378 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	JAC1	P53193	184 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
YPK3	YBR028C	YLR050C	Q12155	161 aa	Known RBP	2.66	□□□□□ -1.98
YPK3	YBR028C	YHR214C-E	Q8TGK0	99 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	UTP30	P36144	274 aa	Known RBP	2.66	□□□□□ -1.98
YPK3	YBR028C	YER076C	P40049	302 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	MOG1	P47123	218 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	YNR062C	P53748	327 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	MAK3	Q03503	176 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	YMR315W	Q04869	349 aa	Known RBP	2.66	□□□□□ -1.98
YPK3	YBR028C	YPR127W	Q06494	345 aa		2.66	□□□□□ -1.98
YPK3	YBR028C	USB1	Q12208	290 aa	Known RBP	2.66	□□□□□ -1.98
YPK3	YBR028C	CDC7	P06243	507 aa		2.65	□□□□□ -1.99
YPK3	YBR028C	ERV15	P38312	142 aa		2.65	□□□□□ -1.99
YPK3	YBR028C	PDS1	P40316	373 aa	Predicted RBP	2.65	□□□□□ -1.99
YPK3	YBR028C	YGR050C	P53231	118 aa		2.65	□□□□□ -1.99
YPK3	YBR028C	RDI1	Q12434	202 aa		2.65	□□□□□ -1.99
YPK3	YBR028C	IGO2	Q9P305	131 aa		2.65	□□□□□ -1.99
YPK3	YBR028C	TAF2	P23255	1407 aa		2.64	□□□□□ -1.99
YPK3	YBR028C	IDP1	P21954	428 aa	Known RBP	2.64	□□□□□ -1.99
YPK3	YBR028C	CLG1	P35190	452 aa		2.64	□□□□□ -1.99
YPK3	YBR028C	COG5	P53951	403 aa		2.64	□□□□□ -1.99
YPK3	YBR028C	AIM34	Q03673	198 aa		2.64	□□□□□ -1.99
YPK3	YBR028C	YOL024W	Q08172	172 aa		2.64	□□□□□ -1.99
YPK3	YBR028C	MCP1	Q12106	302 aa		2.64	□□□□□ -1.99
YPK3	YBR028C	YOR1	P53049	1477 aa		2.63	□□□□□ -1.99
YPK3	YBR028C	NHP6A	P11632	93 aa	Known RBP	2.63	□□□□□ -1.99
YPK3	YBR028C	BUB2	P26448	306 aa	Predicted RBP	2.63	□□□□□ -1.99
YPK3	YBR028C	PTM1	P32857	523 aa		2.63	□□□□□ -1.99
YPK3	YBR028C	CPR5	P35176	225 aa		2.63	□□□□□ -1.99
YPK3	YBR028C	YKR041W	P36134	250 aa		2.63	□□□□□ -1.99
YPK3	YBR028C	CYT2	Q00873	224 aa		2.63	□□□□□ -1.99
YPK3	YBR028C	DYN3	Q04949	312 aa		2.63	□□□□□ -1.99
YPK3	YBR028C	RFU1	Q08003	200 aa		2.63	□□□□□ -1.99
YPK3	YBR028C	MDM32	Q12171	622 aa		2.63	□□□□□ -1.99
YPK3	YBR028C	PEX11	Q12462	236 aa		2.63	□□□□□ -1.99
YPK3	YBR028C	CMD1	P06787	147 aa	Known RBP	2.62	□□□□□ -1.99
YPK3	YBR028C	MRS1	P07266	363 aa		2.62	□□□□□ -1.99
YPK3	YBR028C	UBC8	P28263	218 aa		2.62	□□□□□ -1.99
YPK3	YBR028C	YHR022C	P38763	256 aa		2.62	□□□□□ -1.99
YPK3	YBR028C	PGD1	P40356	397 aa		2.62	□□□□□ -1.99
YPK3	YBR028C	RPL33B	P41056	107 aa	Known RBP	2.62	□□□□□ -1.99
YPK3	YBR028C	LSM7	P53905	115 aa	Known RBP	2.62	□□□□□ -1.99
YPK3	YBR028C	SWP1	Q02795	286 aa		2.62	□□□□□ -1.99
YPK3	YBR028C	PLP1	Q04004	230 aa		2.62	□□□□□ -1.99
YPK3	YBR028C	YPD1	Q07688	167 aa		2.62	□□□□□ -1.99
YPK3	YBR028C	YPL162C	Q12042	273 aa		2.62	□□□□□ -1.99
YPK3	YBR028C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.62	□□□□□ -1.99
YPK3	YBR028C	RAD50	P12753	1312 aa		2.62	□□□□□ -1.99
YPK3	YBR028C	PET9	P18239	318 aa	Known RBP	2.61	□□□□□ -1.99
YPK3	YBR028C	RMD6	P39975	231 aa		2.61	□□□□□ -1.99
YPK3	YBR028C	LSM4	P40070	187 aa	Known RBP	2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 95.9 ms