RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C TNA1P53322 534 aa3.53□□□□□ -1.84
PTA1YAL043C CWC27Q02770 301 aa3.53□□□□□ -1.84
PTA1YAL043C YMR090WQ04304 227 aaKnown RBP3.53□□□□□ -1.84
PTA1YAL043C FIT1Q04433 528 aa3.53□□□□□ -1.84
PTA1YAL043C YML053CQ04978 212 aa3.53□□□□□ -1.84
PTA1YAL043C YLR456WQ06199 204 aa3.53□□□□□ -1.84
PTA1YAL043C AGC1Q12482 902 aa3.53□□□□□ -1.84
PTA1YAL043C HUG1Q6Q5K6 68 aa3.53□□□□□ -1.84
PTA1YAL043C CDC39P25655 2108 aaKnown RBP3.53□□□□□ -1.84
PTA1YAL043C ADH3P07246 375 aaKnown RBP3.53□□□□□ -1.84
PTA1YAL043C QCR2P07257 368 aa3.53□□□□□ -1.84
PTA1YAL043C SPS4P09937 338 aa3.53□□□□□ -1.84
PTA1YAL043C MSI1P13712 422 aa3.53□□□□□ -1.84
PTA1YAL043C ERG2P32352 222 aa3.53□□□□□ -1.84
PTA1YAL043C SOF1P33750 489 aaKnown RBP3.53□□□□□ -1.84
PTA1YAL043C YER079WP40052 210 aaKnown RBP3.53□□□□□ -1.84
PTA1YAL043C MSY1P48527 492 aa3.53□□□□□ -1.84
PTA1YAL043C DUO1P53168 247 aaKnown RBP3.53□□□□□ -1.84
PTA1YAL043C APJ1P53940 528 aa3.53□□□□□ -1.84
PTA1YAL043C DIA1P54005 336 aa3.53□□□□□ -1.84
PTA1YAL043C TMA23Q03525 211 aa3.53□□□□□ -1.84
PTA1YAL043C HOF1Q05080 669 aa3.53□□□□□ -1.84
PTA1YAL043C MRX9Q07349 420 aaKnown RBP3.53□□□□□ -1.84
PTA1YAL043C YDL242WQ07746 117 aa3.53□□□□□ -1.84
PTA1YAL043C DAP1Q12091 152 aa3.53□□□□□ -1.84
PTA1YAL043C RNH203Q12338 110 aa3.53□□□□□ -1.84
PTA1YAL043C MRPL23Q12487 163 aaPredicted RBP3.53□□□□□ -1.84
PTA1YAL043C COX19Q3E731 98 aa3.53□□□□□ -1.84
PTA1YAL043C URA5P13298 226 aaKnown RBP3.52□□□□□ -1.85
PTA1YAL043C RPL30P14120 105 aaKnown RBP3.52□□□□□ -1.85
PTA1YAL043C MRPL28P36527 147 aa3.52□□□□□ -1.85
PTA1YAL043C ADH5P38113 351 aaKnown RBP3.52□□□□□ -1.85
PTA1YAL043C BNS1P50084 137 aa3.52□□□□□ -1.85
PTA1YAL043C SMM1P53720 384 aaKnown RBP3.52□□□□□ -1.85
PTA1YAL043C SNP1Q00916 300 aaPredicted RBP3.52□□□□□ -1.85
PTA1YAL043C YPL080CQ02826 108 aa3.52□□□□□ -1.85
PTA1YAL043C FSH2Q05015 223 aa3.52□□□□□ -1.85
PTA1YAL043C YOR186WQ08560 144 aa3.52□□□□□ -1.85
PTA1YAL043C FYV7Q12247 151 aa3.52□□□□□ -1.85
PTA1YAL043C OCH1P31755 480 aa3.52□□□□□ -1.85
PTA1YAL043C YOX1P34161 385 aa3.52□□□□□ -1.85
PTA1YAL043C YER085CP40058 173 aa3.52□□□□□ -1.85
PTA1YAL043C HUA1P40325 198 aa3.52□□□□□ -1.85
PTA1YAL043C FLX1P40464 311 aa3.52□□□□□ -1.85
PTA1YAL043C YPL077CQ02831 240 aa3.52□□□□□ -1.85
PTA1YAL043C ATG21Q02887 496 aa3.52□□□□□ -1.85
PTA1YAL043C SDC1Q03323 175 aa3.52□□□□□ -1.85
PTA1YAL043C PKR1Q03880 122 aaKnown RBP3.52□□□□□ -1.85
PTA1YAL043C YAP6Q03935 383 aa3.52□□□□□ -1.85
PTA1YAL043C ARR3Q06598 404 aa3.52□□□□□ -1.85
PTA1YAL043C FCY22Q12119 530 aa3.52□□□□□ -1.85
PTA1YAL043C MIR1P23641 311 aaKnown RBP3.51□□□□□ -1.85
PTA1YAL043C YCR025CP25352 136 aa3.51□□□□□ -1.85
PTA1YAL043C RFA3P26755 122 aaKnown RBP3.51□□□□□ -1.85
PTA1YAL043C SWD3P38123 315 aa3.51□□□□□ -1.85
PTA1YAL043C FAT1P38225 669 aa3.51□□□□□ -1.85
PTA1YAL043C ERV15P38312 142 aa3.51□□□□□ -1.85
PTA1YAL043C CUE1P38428 203 aa3.51□□□□□ -1.85
PTA1YAL043C WSS1P38838 269 aa3.51□□□□□ -1.85
PTA1YAL043C YEA4P40004 342 aa3.51□□□□□ -1.85
PTA1YAL043C POG1P40473 351 aa3.51□□□□□ -1.85
PTA1YAL043C MOB2P43563 287 aa3.51□□□□□ -1.85
PTA1YAL043C YGL185CP53100 379 aa3.51□□□□□ -1.85
PTA1YAL043C MSO1P53604 210 aaKnown RBP3.51□□□□□ -1.85
PTA1YAL043C WSC2P53832 503 aa3.51□□□□□ -1.85
PTA1YAL043C RHO5P53879 331 aaKnown RBP3.51□□□□□ -1.85
PTA1YAL043C NUP53Q03790 475 aa3.51□□□□□ -1.85
PTA1YAL043C YOR376WQ08900 122 aa3.51□□□□□ -1.85
PTA1YAL043C YIL046W-AQ3E7Z4 54 aa3.51□□□□□ -1.85
PTA1YAL043C YIL134C-AQ45U18 67 aa3.51□□□□□ -1.85
PTA1YAL043C HFA1P32874 2273 aa3.51□□□□□ -1.85
PTA1YAL043C TRP4P07285 380 aaPredicted RBP3.51□□□□□ -1.85
PTA1YAL043C SCO1P23833 295 aa3.51□□□□□ -1.85
PTA1YAL043C DAD2P36162 133 aa3.51□□□□□ -1.85
PTA1YAL043C MRPL4P36517 319 aa3.51□□□□□ -1.85
PTA1YAL043C AME1P38313 324 aa3.51□□□□□ -1.85
PTA1YAL043C GWT1P47026 490 aa3.51□□□□□ -1.85
PTA1YAL043C PUS4P48567 403 aaKnown RBP3.51□□□□□ -1.85
PTA1YAL043C YNR066CP53752 436 aa3.51□□□□□ -1.85
PTA1YAL043C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
PTA1YAL043C MDM30Q05930 598 aa3.51□□□□□ -1.85
PTA1YAL043C FRQ1Q06389 190 aa3.51□□□□□ -1.85
PTA1YAL043C YLR030WQ07967 263 aa3.51□□□□□ -1.85
PTA1YAL043C LAS17Q12446 633 aa3.51□□□□□ -1.85
PTA1YAL043C ERG27Q12452 347 aaKnown RBP3.51□□□□□ -1.85
PTA1YAL043C YHR214C-DP0CX93 97 aa3.5□□□□□ -1.85
PTA1YAL043C COQ3P27680 312 aa3.5□□□□□ -1.85
PTA1YAL043C POP5P28005 173 aa3.5□□□□□ -1.85
PTA1YAL043C MKK2P32491 506 aa3.5□□□□□ -1.85
PTA1YAL043C ALK2P32789 676 aaPredicted RBP3.5□□□□□ -1.85
PTA1YAL043C MCH2P36032 473 aa3.5□□□□□ -1.85
PTA1YAL043C PHD1P36093 366 aa3.5□□□□□ -1.85
PTA1YAL043C MRPL11P36521 249 aaPredicted RBP3.5□□□□□ -1.85
PTA1YAL043C RMD6P39975 231 aa3.5□□□□□ -1.85
PTA1YAL043C CRH1P53301 507 aa3.5□□□□□ -1.85
PTA1YAL043C DIG2Q03373 323 aaKnown RBP3.5□□□□□ -1.85
PTA1YAL043C ATC1Q04005 294 aa3.5□□□□□ -1.85
PTA1YAL043C YMR082CQ04276 118 aa3.5□□□□□ -1.85
PTA1YAL043C COQ11Q05892 277 aa3.5□□□□□ -1.85
PTA1YAL043C NAT3Q06504 195 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms