RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 HSCBQ8IWL3 235 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 SYNPOQ8N3V7 929 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 PIGOQ8TEQ8 1089 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 MSANTD3Q96H12 275 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 ZNF512Q96ME7 567 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-212ENST00000641247 FAM20AQ96MK3 541 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 HHIPQ96QV1 700 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 HSD17B14Q9BPX1 270 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 TM6SF1Q9BZW5 370 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 POLD4Q9HCU8 107 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 SH3GLB2Q9NR46 395 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 GPSM3Q9Y4H4 160 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 AKAP13Q12802 2813 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 GREB1Q4ZG55 1949 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 SMIM28A0A1B0GU29 152 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 ANTXRLA6NF34 631 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 LRRIQ4A6NIV6 560 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 MEFVO15553 781 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-212ENST00000641247 DTNBO60941 627 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 DGAT1O75907 488 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 AKAP3O75969 853 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 CLCN1P35523 988 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 RARRES1P49788 294 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 NEK4P51957 841 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 IRX4P78413 519 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 FAM187BQ17R55 369 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 DAB2IPQ5VWQ8 1189 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 CDCA2Q69YH5 1023 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-212ENST00000641247 IQCEQ6IPM2 695 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 GAREM2Q75VX8 874 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 POTEDQ86YR6 584 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 YAF2Q8IY57 180 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 CEP120Q8N960 986 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 EZH1Q92800 747 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-212ENST00000641247 ZMAT2Q96NC0 199 aaKnown RBP10.67□□□□□ -0.7
PHGDH-212ENST00000641247 TMEM209Q96SK2 561 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 EIF2AK1Q9BQI3 630 aaKnown RBP10.67□□□□□ -0.7
PHGDH-212ENST00000641247 ZMYND15Q9H091 742 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 SMG9Q9H0W8 520 aaKnown RBP10.67□□□□□ -0.7
PHGDH-212ENST00000641247 ZSWIM6Q9HCJ5 1215 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 PRMT7Q9NVM4 692 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-212ENST00000641247 KCNJ14Q9UNX9 436 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 MSRB2Q9Y3D2 182 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 NEUROG3Q9Y4Z2 214 aa10.67□□□□□ -0.7
PHGDH-212ENST00000641247 SMG1Q96Q15 3661 aaKnown RBP10.67□□□□□ -0.7
PHGDH-212ENST00000641247 SPAARA0A1B0GVQ0 90 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 LYPLA2O95372 231 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 PRAMEF12O95522 483 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 EGFP01133 1207 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 OR4Q2P0C623 313 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 MCM2P49736 904 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 FAM193AP78312 1265 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 AKAP17AQ02040 695 aaKnown RBP10.66□□□□□ -0.7
PHGDH-212ENST00000641247 UAP1L1Q3KQV9 507 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 TMEM196Q5HYL7 178 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 NT5DC1Q5TFE4 455 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 PPP4R3AQ6IN85 833 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 C1orf228Q6PIY5 440 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 ALKAL1Q6UXT8 129 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 MTERF4Q7Z6M4 381 aaKnown RBP10.66□□□□□ -0.7
PHGDH-212ENST00000641247 PDZD3Q86UT5 571 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 PROSER1Q86XN7 944 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 DAGLBQ8NCG7 672 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 E2F7Q96AV8 911 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 PRIMPOLQ96LW4 560 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 JAKMIP1Q96N16 626 aaKnown RBP10.66□□□□□ -0.7
PHGDH-212ENST00000641247 CCDC113Q9H0I3 377 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 SLITRK6Q9H5Y7 841 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 HPS4Q9NQG7 708 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 ASAH2Q9NR71 780 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 GJB4Q9NTQ9 266 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 ANKEF1Q9NU02 776 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 AFF4Q9UHB7 1163 aaKnown RBP10.66□□□□□ -0.7
PHGDH-212ENST00000641247 SLC8A2Q9UPR5 921 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 RALGAPA1Q6GYQ0 2036 aa10.66□□□□□ -0.7
PHGDH-212ENST00000641247 SETXQ7Z333 2677 aaKnown RBP10.65□□□□□ -0.7
PHGDH-212ENST00000641247 LAMA5O15230 3695 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 FAM205CA6NFA0 338 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 K7ELQ4 463 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-212ENST00000641247 PODXLO00592 558 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 N4BP3O15049 544 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 TRAPPC3O43617 180 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 USO1O60763 962 aaKnown RBP10.65□□□□□ -0.7
PHGDH-212ENST00000641247 RNF40O75150 1001 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 CD2BP2O95400 341 aaKnown RBP10.65□□□□□ -0.7
PHGDH-212ENST00000641247 LIG1P18858 919 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 U2AF2P26368 475 aaKnown RBP eCLIP10.65□□□□□ -0.74e-10■■□□□ 11.5
PHGDH-212ENST00000641247 PDIA3P30101 505 aaKnown RBP10.65□□□□□ -0.7
PHGDH-212ENST00000641247 PRPF4BQ13523 1007 aaKnown RBP10.65□□□□□ -0.7
PHGDH-212ENST00000641247 COL28A1Q2UY09 1125 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 CTXN3Q4LDR2 81 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 ARHGAP29Q52LW3 1261 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 XKR4Q5GH76 650 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 TPGS2Q68CL5 300 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 TRIM68Q6AZZ1 485 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 RUFY3Q7L099 469 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 CAMKK1Q8N5S9 505 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 RIN3Q8TB24 985 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 FAM200AQ8TCP9 573 aa10.65□□□□□ -0.7
PHGDH-212ENST00000641247 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms