RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 CRNKL1Q9BZJ0 848 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 DPH5Q9H2P9 285 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CHMP1AQ9HD42 196 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 INTS10Q9NVR2 710 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SAGE1Q9NXZ1 904 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 DNAJB4Q9UDY4 337 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 GIMAP2Q9UG22 337 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 WARS2Q9UGM6 360 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 FBXL21Q9UKT6 434 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PALD1Q9ULE6 856 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 WBP11Q9Y2W2 641 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 KRIT1O00522 736 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 BUB1O43683 1085 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 BRINP1O60477 761 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CCNT1O60563 726 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MYL6BP14649 208 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CFL1P23528 166 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CCNA1P78396 465 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 PLCB3Q01970 1234 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 SPATS1Q496A3 300 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 SNAP47Q5SQN1 464 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 FAM122CQ6P4D5 195 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CRELD2Q6UXH1 353 aaPredicted RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ZC3H18Q86VM9 953 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 PHC2Q8IXK0 858 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 C16orf71Q8IYS4 520 aaPredicted RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MRPL50Q8N5N7 158 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 C12orf50Q8NA57 414 aaPredicted RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TEX47Q8TBZ9 253 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 COG1Q8WTW3 980 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CHAC2Q8WUX2 184 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF606Q8WXB4 792 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 PEX13Q92968 403 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TRIM43Q96BQ3 446 aaPredicted RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 B3GALT6Q96L58 329 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MOV10L1Q9BXT6 1211 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TPK1Q9H3S4 243 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 LIN28AQ9H9Z2 209 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 FBRSQ9HAH7 460 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 PPP1R14DQ9NXH3 145 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 BTBD7Q9P203 1132 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TRIM33Q9UPN9 1127 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CYP46A1Q9Y6A2 500 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MKI67P46013 3256 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TECPR2O15040 1411 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MINK1Q8N4C8 1332 aaPredicted RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MYO3BQ8WXR4 1341 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 OR6C74A6NCV1 312 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TK2O00142 265 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 FPGTO14772 594 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 N4BP3O15049 544 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 KLHL18O94889 574 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 APBB3O95704 486 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CRYZL1O95825 349 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 SYF2O95926 243 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 IFNB1P01574 187 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 KRT8P05787 483 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 PORP16435 677 aaPredicted RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ATP2B4P23634 1241 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 SERPINB3P29508 390 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 RPL9P32969 192 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ADH7P40394 386 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 HTR2BP41595 481 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 KCNJ5P48544 419 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 HSPA13P48723 471 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MTHFSP49914 203 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 BPIFB4P59827 614 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TBX2Q13207 712 aaPredicted RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 LAPTM5Q13571 262 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MAPK6Q16659 721 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 KLHL38Q2WGJ6 581 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ZMYM1Q5SVZ6 1142 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF704Q6ZNC4 412 aaPredicted RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 P3H2Q8IVL5 708 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC22A9Q8IVM8 553 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 SCUBE1Q8IWY4 988 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CDAN1Q8IWY9 1227 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 LRRC71Q8N4P6 559 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF366Q8N895 744 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 STKLD1Q8NE28 680 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 STARD8Q92502 1023 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 BRF1Q92994 677 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 BBS2Q9BXC9 721 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 SP140LQ9H930 580 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 POLE3Q9NRF9 147 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MOCS1Q9NZB8 636 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.09□□□□□ -1.751e-6■■■■□ 23.1
R3HDM1-220ENST00000628915 SAMD15Q9P1V8 674 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CNTN3Q9P232 1028 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 HESX1Q9UBX0 185 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TELO2Q9Y4R8 837 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ALS2Q96Q42 1657 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 AOX1Q06278 1338 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 NSD2O96028 1365 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MATN2O00339 956 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 GNB5O14775 395 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CYP27B1O15528 508 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 PLOD3O60568 738 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ASS1P00966 412 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms