RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 MYOZ2Q9NPC6 264 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 ZNRF3Q9ULT6 936 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 ZNF541Q9H0D2 1346 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 TLR3O15455 904 aaKnown RBP12.52□□□□□ -0.41
C11orf54-215ENST00000617482 SUN1O94901 812 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 ATP6V1G2O95670 118 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 OAS1P00973 400 aaKnown RBP12.52□□□□□ -0.41
C11orf54-215ENST00000617482 ZSCAN5DPP0CG00 497 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 STX2P32856 288 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 GSCP56915 257 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-215ENST00000617482 ACTR2P61160 394 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 RPL7AP62424 266 aaKnown RBP12.52□□□□□ -0.41
C11orf54-215ENST00000617482 NOMO3P69849 1222 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 CUL2Q13617 745 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 PSMD6Q15008 389 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 P3H1Q32P28 736 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 CRELD2Q6UXH1 353 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-215ENST00000617482 NIM1KQ8IY84 436 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 ABRAQ8N0Z2 381 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 GLIS1Q8NBF1 620 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 AGBL3Q8NEM8 1001 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 GPRASP2Q96D09 838 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 RBM15Q96T37 977 aaKnown RBP eCLIP12.52□□□□□ -0.41
C11orf54-215ENST00000617482 PAIP2Q9BPZ3 127 aaKnown RBP12.52□□□□□ -0.41
C11orf54-215ENST00000617482 SENP7Q9BQF6 1050 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 JPH1Q9HDC5 661 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-215ENST00000617482 ANKFY1Q9P2R3 1169 aa12.52□□□□□ -0.41
C11orf54-215ENST00000617482 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.41
C11orf54-215ENST00000617482 KCNJ2P63252 427 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 CLDN10P78369 228 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 STRN3Q13033 797 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 PREPLQ4J6C6 727 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 TEPSINQ96N21 525 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 ECT2Q9H8V3 914 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 MRPL47Q9HD33 250 aaKnown RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 RBAKQ9NYW8 714 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 SLC9A2Q9UBY0 812 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 LRRIQ4A6NIV6 560 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 RASA4BC9J798 803 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 RASA4O43374 803 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 PSTPIP1O43586 416 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 CDH16O75309 829 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 HARSP12081 509 aaKnown RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 ETS1P14921 441 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 ATF7P17544 494 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 MAGEA4P43358 317 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 POLGP54098 1239 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 PTP4A2Q12974 167 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 NFX1Q12986 1120 aaKnown RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 TMED2Q15363 201 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 SPATA21Q7Z572 469 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 KATNAL2Q8IYT4 538 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 RBBP8NLQ8NC74 664 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 ZBED3Q96IU2 234 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 NOD2Q9HC29 1040 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 KIAA1586Q9HCI6 787 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 PNMA3Q9UL41 463 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 DNPEPQ9ULA0 475 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 NUB1Q9Y5A7 615 aa12.51□□□□□ -0.41
C11orf54-215ENST00000617482 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
C11orf54-215ENST00000617482 TCEA3O75764 348 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 POTEJP0CG39 1038 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 TMEM63BQ5T3F8 832 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 PLEKHA7Q6IQ23 1121 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 KIF2BQ8N4N8 673 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 OR5B17Q8NGF7 314 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 EXD1Q8NHP7 514 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 NSUN6Q8TEA1 469 aaKnown RBP12.5□□□□□ -0.41
C11orf54-215ENST00000617482 ACSF2Q96CM8 615 aaPredicted RBP12.5□□□□□ -0.41
C11orf54-215ENST00000617482 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 CCDC77Q9BR77 488 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 TARS2Q9BW92 718 aaKnown RBP12.5□□□□□ -0.41
C11orf54-215ENST00000617482 ADAM33Q9BZ11 813 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 NKIRAS1Q9NYS0 192 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 ZNF148Q9UQR1 794 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 K7ERI5 159 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 DKC1O60832 514 aaKnown RBP eCLIP12.5□□□□□ -0.41
C11orf54-215ENST00000617482 SPAG7O75391 227 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 KLRC2P26717 231 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 RTP1P59025 263 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 NCALDP61601 193 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 EMC2Q15006 297 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 WLSQ5T9L3 541 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 MIS18BP1Q6P0N0 1132 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 ABHD15Q6UXT9 468 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 ARHGEF18Q6ZSZ5 1173 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 FITM2Q8N6M3 262 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 FEZF2Q8TBJ5 459 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 HAUS1Q96CS2 278 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 MRRFQ96E11 262 aaKnown RBP12.5□□□□□ -0.41
C11orf54-215ENST00000617482 THOC1Q96FV9 657 aaKnown RBP12.5□□□□□ -0.41
C11orf54-215ENST00000617482 MYCBPQ99417 103 aaPredicted RBP12.5□□□□□ -0.41
C11orf54-215ENST00000617482 MSTO1Q9BUK6 570 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 SAYSD1Q9NPB0 183 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 FBXO40Q9UH90 709 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 FZD1Q9UP38 647 aa12.5□□□□□ -0.41
C11orf54-215ENST00000617482 ARL2BPQ9Y2Y0 163 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms