RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PPP3CAQ08209 521 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 DUOXA2Q1HG44 320 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 IER5LQ5T953 404 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 CDKAL1Q5VV42 579 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 SCARA3Q6AZY7 606 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 TRIM59Q8IWR1 403 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 DHX40Q8IX18 779 aaKnown RBP20.35■□□□□ 0.85
CCDC9-205ENST00000600117 C1orf127Q8N9H9 656 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 CACTINQ8WUQ7 758 aaKnown RBP20.35■□□□□ 0.85
CCDC9-205ENST00000600117 BCL7CQ8WUZ0 217 aaPredicted RBP20.35■□□□□ 0.85
CCDC9-205ENST00000600117 RABGGTAQ92696 567 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 UROC1Q96N76 676 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 HSD3B7Q9H2F3 369 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 MARCH5Q9NX47 278 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 DPP3Q9NY33 737 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 RWDD3Q9Y3V2 267 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 CACNA1AO00555 2505 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 ANO9A1A5B4 782 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 TMEM221A6NGB7 291 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 NT5C1B-RDH14C9J2C7 533 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 M0R296 226 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 PPEF2O14830 753 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 IKBKBO14920 756 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 C4BPAP04003 597 aaKnown RBP20.34■□□□□ 0.85
CCDC9-205ENST00000600117 ALDH2P05091 517 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 TMEM191BP0C7N4 346 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 RPL9P32969 192 aaKnown RBP20.34■□□□□ 0.85
CCDC9-205ENST00000600117 CLCNKBP51801 687 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 UPP1Q16831 310 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 CD300LGQ6UXG3 332 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 C15orf39Q6ZRI6 1047 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 TRIM67Q6ZTA4 783 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 SLC35C1Q96A29 364 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 PBXIP1Q96AQ6 731 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 DDX27Q96GQ7 796 aaKnown RBP20.34■□□□□ 0.85
CCDC9-205ENST00000600117 ANKRD36BP1Q96IX9 119 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 C11orf84Q9BUA3 381 aaPredicted RBP20.34■□□□□ 0.85
CCDC9-205ENST00000600117 CBX8Q9HC52 389 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 AAASQ9NRG9 546 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 FANCLQ9NW38 375 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 SIX4Q9UIU6 781 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 FAN1Q9Y2M0 1017 aa20.34■□□□□ 0.85
CCDC9-205ENST00000600117 PRG3Q9Y2Y8 225 aaPredicted RBP20.34■□□□□ 0.85
CCDC9-205ENST00000600117 KMT2EQ8IZD2 1858 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 TMEM189-UBE2V1I3L0A0 370 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 PODXLO00592 558 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 TBX10O75333 385 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 KIF4AO95239 1232 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 CAVIN2O95810 425 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 TNNC2P02585 160 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 ALDH7A1P49419 539 aaKnown RBP20.33■□□□□ 0.85
CCDC9-205ENST00000600117 AP3M2P53677 418 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 TDRD10Q5VZ19 366 aaKnown RBP20.33■□□□□ 0.85
CCDC9-205ENST00000600117 C9orf57Q5W0N0 161 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 TRAPPC11Q7Z392 1133 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 USP37Q86T82 979 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 SUGP1Q8IWZ8 645 aaKnown RBP20.33■□□□□ 0.85
CCDC9-205ENST00000600117 C3orf58Q8NDZ4 430 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 PLVAPQ9BX97 442 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 TSPY26PQ9H489 355 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 CD207Q9UJ71 328 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 ITGA11Q9UKX5 1188 aa20.33■□□□□ 0.85
CCDC9-205ENST00000600117 CARNS1A5YM72 827 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 PIRO00625 290 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 GRM6O15303 877 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 EFEMP2O95967 443 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 ITGB1P05556 798 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 ZNF18P17022 549 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 PPM1AP35813 382 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 GCLMP48507 274 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 TCF15Q12870 199 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 ZACNQ401N2 412 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 HSP90AA4PQ58FG1 418 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 DCAF17Q5H9S7 520 aaPredicted RBP20.32■□□□□ 0.84
CCDC9-205ENST00000600117 DCLRE1AQ6PJP8 1040 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 SV2AQ7L0J3 742 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 KLHL23Q8NBE8 558 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 IGSF21Q96ID5 467 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 COLEC11Q9BWP8 271 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 SPG21Q9NZD8 308 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 PCDHB12Q9Y5F1 795 aa20.32■□□□□ 0.84
CCDC9-205ENST00000600117 FAM186AA6NE01 2351 aa20.31■□□□□ 0.84
CCDC9-205ENST00000600117 SCN1AP35498 2009 aa20.31■□□□□ 0.84
CCDC9-205ENST00000600117 FGF18O76093 207 aa20.31■□□□□ 0.84
CCDC9-205ENST00000600117 ITGB3P05106 788 aa20.31■□□□□ 0.84
CCDC9-205ENST00000600117 POLR2BP30876 1174 aaKnown RBP20.31■□□□□ 0.84
CCDC9-205ENST00000600117 GTF2H1P32780 548 aa20.31■□□□□ 0.84
CCDC9-205ENST00000600117 TCERG1LQ5VWI1 586 aa20.31■□□□□ 0.84
CCDC9-205ENST00000600117 FAM114A1Q8IWE2 563 aa20.31■□□□□ 0.84
CCDC9-205ENST00000600117 VN1R3Q9BXE9 311 aa20.31■□□□□ 0.84
CCDC9-205ENST00000600117 TMEM8AQ9HCN3 771 aa20.31■□□□□ 0.84
CCDC9-205ENST00000600117 PLXNA4Q9HCM2 1894 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 SMTNL1A8MU46 457 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 KCNJ18B7U540 433 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 B3GAT3O94766 335 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 VNN1O95497 513 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 CST3P01034 146 aaPredicted RBP20.3■□□□□ 0.84
CCDC9-205ENST00000600117 FOXK2Q01167 660 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 PLCB3Q01970 1234 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 ADAM15Q13444 863 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms