RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 EPB41P11171 864 aaKnown RBP21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 PNPLA4P41247 253 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 NDUFV1P49821 464 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 RBP5P82980 135 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 FKBP3Q00688 224 aaKnown RBP21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 PAK1Q13153 545 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 ADAM15Q13444 863 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 SV2CQ496J9 727 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 LLGL2Q6P1M3 1020 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 PPFIBP1Q86W92 1011 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 GLYCTKQ8IVS8 523 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 APPL2Q8NEU8 664 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 TMC2Q8TDI7 906 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 PARD3BQ8TEW8 1205 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 RXFP1Q9HBX9 757 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 FNIP2Q9P278 1114 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 PCDHB8Q9UN66 801 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 ARHGEF37A1IGU5 675 aa21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 LRRIQ3A6PVS8 624 aaPredicted RBP21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 M0QZQ0 153 aa21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 TEX28O15482 410 aa21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 AARSP49588 968 aaKnown RBP eCLIP21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 BFSP1Q12934 665 aa21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 VARS2Q5ST30 1063 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 ANKS3Q6ZW76 656 aa21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 INTS8Q75QN2 995 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 TRAPPC11Q7Z392 1133 aa21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 LNX1Q8TBB1 728 aaPredicted RBP21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 PLEKHO2Q8TD55 490 aa21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 EEF2KMTQ96G04 330 aa21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 SENP8Q96LD8 212 aa21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 MKNK1Q9BUB5 465 aa21.2■□□□□ 0.98
SHKBP1-214ENST00000597396 H7C4K7 107 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 SPTLC1O15269 473 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 PHACTR2O75167 634 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 ODC1P11926 461 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 RPL17P18621 184 aaKnown RBP21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 KCNA5P22460 613 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 KCNQ1P51787 676 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 VAMP7P51809 220 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 AP3M2P53677 418 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 STX17P56962 302 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 BIRC3Q13489 604 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 COL19A1Q14993 1142 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 CTC1Q2NKJ3 1217 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 LRRC52Q8N7C0 313 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 MLKLQ8NB16 471 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 CASP10Q92851 521 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 GZF1Q9H116 711 aaPredicted RBP21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 SIX4Q9UIU6 781 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 HCFC2Q9Y5Z7 792 aa21.19■□□□□ 0.98
SHKBP1-214ENST00000597396 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 KPNA7A9QM74 516 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 GLP2RO95838 553 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 BMP1P13497 986 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 DLG4P78352 724 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 RBM10P98175 930 aaKnown RBP21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 MYO1EQ12965 1108 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 TRPC3Q13507 836 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 CCDC183Q5T5S1 534 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 ZNF280DQ6N043 979 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 TTI2Q6NXR4 508 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 ZC3H3Q8IXZ2 948 aaKnown RBP21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 ZNF516Q92618 1163 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 NECAB3Q96P71 396 aaPredicted RBP21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 MTRRQ9UBK8 725 aa21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 BARX2Q9UMQ3 279 aaPredicted RBP21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 TIMM13Q9Y5L4 95 aaPredicted RBP21.18■□□□□ 0.98
SHKBP1-214ENST00000597396 SPDYE4A6NLX3 237 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 CYB561D2O14569 222 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 SLC16A3O15427 465 aaKnown RBP21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 TBX10O75333 385 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 GLUD1P00367 558 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 EPCAMP16422 314 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 PTMSP20962 102 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 CLCN4P51793 760 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 NLRP12P59046 1061 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 YWHAHQ04917 246 aaPredicted RBP21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 CTXN3Q4LDR2 81 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 FOXR2Q6PJQ5 311 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 PALB2Q86YC2 1186 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 VN1R2Q8NFZ6 395 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 CXorf38Q8TB03 319 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 SLC22A17Q8WUG5 538 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 DACH1Q9UI36 760 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 BACE2Q9Y5Z0 518 aa21.17■□□□□ 0.98
SHKBP1-214ENST00000597396 MUC3AQ02505 3323 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 H3BQ06 376 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 CLSTN1O94985 981 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 TRIM49P0CI25 452 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 TRIM49CP0CI26 452 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 TYMPP19971 482 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 LTBRP36941 435 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 CLDN10P78369 228 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 ENPEPQ07075 957 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 DLX2Q07687 328 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 KCNC3Q14003 757 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 METTL23Q86XA0 190 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 HPDLQ96IR7 371 aa21.16■□□□□ 0.98
SHKBP1-214ENST00000597396 CEP63Q96MT8 703 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms