RNA–Protein interactions for RNA: ENST00000595652.5

SCN1B-203, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2 BASIC

Gene SCN1B, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-203ENST00000595652 NAP1L5Q96NT1 182 aaPredicted RBP22.76■■□□□ 1.23
SCN1B-203ENST00000595652 SAMD11Q96NU1 681 aa22.76■■□□□ 1.23
SCN1B-203ENST00000595652 XYLT2Q9H1B5 865 aa22.76■■□□□ 1.23
SCN1B-203ENST00000595652 GCNT4Q9P109 453 aa22.76■■□□□ 1.23
SCN1B-203ENST00000595652 NXF1Q9UBU9 619 aaKnown RBP22.76■■□□□ 1.23
SCN1B-203ENST00000595652 POLIQ9UNA4 740 aa22.76■■□□□ 1.23
SCN1B-203ENST00000595652 COQ4Q9Y3A0 265 aa22.76■■□□□ 1.23
SCN1B-203ENST00000595652 VWA8A3KMH1 1905 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 CARNS1A5YM72 827 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 LRRC10BA6NIK2 292 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 ATICP31939 592 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 UBXN1Q04323 297 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 PTPN21Q16825 1174 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 SGSM1Q2NKQ1 1148 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 WDR44Q5JSH3 913 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 GBP6Q6ZN66 633 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 EHBP1Q8NDI1 1231 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 SENP8Q96LD8 212 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 PLVAPQ9BX97 442 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 VN1R3Q9BXE9 311 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 GPR62Q9BZJ7 368 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 IMPG2Q9BZV3 1241 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 INTS2Q9H0H0 1204 aaKnown RBP22.75■■□□□ 1.23
SCN1B-203ENST00000595652 ALG13Q9NP73 1137 aaKnown RBP22.75■■□□□ 1.23
SCN1B-203ENST00000595652 IFNKQ9P0W0 207 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 SNX9Q9Y5X1 595 aa22.75■■□□□ 1.23
SCN1B-203ENST00000595652 RANBP2P49792 3224 aaKnown RBP22.75■■□□□ 1.23
SCN1B-203ENST00000595652 KPNA7A9QM74 516 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 PMM2O15305 246 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 TEX33O43247 280 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 ASS1P00966 412 aaKnown RBP22.74■■□□□ 1.23
SCN1B-203ENST00000595652 SLC9A1P19634 815 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 UBASH3AP57075 661 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 NOP14P78316 857 aaKnown RBP22.74■■□□□ 1.23
SCN1B-203ENST00000595652 KRT17Q04695 432 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 EXOC3L4Q17RC7 722 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 ZNF667Q5HYK9 610 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 SCARA5Q6ZMJ2 495 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 TAS1R1Q7RTX1 841 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 TATDN2Q93075 761 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 B3GALT6Q96L58 329 aa22.74■■□□□ 1.23
SCN1B-203ENST00000595652 APOBEC3GQ9HC16 384 aaKnown RBP22.74■■□□□ 1.23
SCN1B-203ENST00000595652 SF3B1O75533 1304 aaKnown RBP eCLIP22.74■■□□□ 1.238e-6■■■■■ 107
SCN1B-203ENST00000595652 COL4A4P53420 1690 aaPredicted RBP22.74■■□□□ 1.23
SCN1B-203ENST00000595652 TSC2P49815 1807 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 C5orf67F2Z3F1 127 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 CYB561D2O14569 222 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 RB1P06400 928 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 AARSP49588 968 aaKnown RBP eCLIP22.73■■□□□ 1.23
SCN1B-203ENST00000595652 TNNC1P63316 161 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 GPM6BQ13491 265 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 WDR72Q3MJ13 1102 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 FAM171A1Q5VUB5 890 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 CEP57Q86XR8 500 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 LMO3Q8TAP4 145 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 TAF4BQ92750 862 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 LRCH3Q96II8 777 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 SUSD3Q96L08 255 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 MMS19Q96T76 1030 aa22.73■■□□□ 1.23
SCN1B-203ENST00000595652 C11orf84Q9BUA3 381 aaPredicted RBP22.73■■□□□ 1.23
SCN1B-203ENST00000595652 LSM14BQ9BX40 385 aaKnown RBP22.73■■□□□ 1.23
SCN1B-203ENST00000595652 RTN4Q9NQC3 1192 aaKnown RBP22.73■■□□□ 1.23
SCN1B-203ENST00000595652 TIMM13Q9Y5L4 95 aaPredicted RBP22.73■■□□□ 1.23
SCN1B-203ENST00000595652 A0A1B0GTH6 734 aa22.72■■□□□ 1.23
SCN1B-203ENST00000595652 GTPBP10A4D1E9 387 aaKnown RBP22.72■■□□□ 1.23
SCN1B-203ENST00000595652 EPOPA6NHQ4 379 aa22.72■■□□□ 1.23
SCN1B-203ENST00000595652 TRAPPC3O43617 180 aa22.72■■□□□ 1.23
SCN1B-203ENST00000595652 STAU1O95793 577 aaKnown RBP22.72■■□□□ 1.23
SCN1B-203ENST00000595652 TKTP29401 623 aaKnown RBP22.72■■□□□ 1.23
SCN1B-203ENST00000595652 KLK7P49862 253 aa22.72■■□□□ 1.23
SCN1B-203ENST00000595652 PLCB3Q01970 1234 aa22.72■■□□□ 1.23
SCN1B-203ENST00000595652 APBA1Q02410 837 aa22.72■■□□□ 1.23
SCN1B-203ENST00000595652 KCNMA1Q12791 1236 aa22.72■■□□□ 1.23
SCN1B-203ENST00000595652 DDX53Q86TM3 631 aaKnown RBP22.72■■□□□ 1.23
SCN1B-203ENST00000595652 GDPD5Q8WTR4 605 aa22.72■■□□□ 1.23
SCN1B-203ENST00000595652 PCMTD1Q96MG8 357 aaPredicted RBP22.72■■□□□ 1.23
SCN1B-203ENST00000595652 NT5C1BQ96P26 610 aa22.72■■□□□ 1.23
SCN1B-203ENST00000595652 RFXAPO00287 272 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 GRM6O15303 877 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 PON1P27169 355 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 RAP1GAPP47736 663 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 ELAVL2Q12926 359 aaKnown RBP22.71■■□□□ 1.23
SCN1B-203ENST00000595652 SYCP1Q15431 976 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 VPS52Q8N1B4 723 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 SPPL3Q8TCT6 385 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 POF1BQ8WVV4 589 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 HERC2P3Q9BVR0 1158 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 XPO4Q9C0E2 1151 aaKnown RBP22.71■■□□□ 1.23
SCN1B-203ENST00000595652 ZNF576Q9H609 170 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 SMYD3Q9H7B4 428 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 VRTNQ9H8Y1 702 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 GDAP2Q9NXN4 497 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 PCDHB8Q9UN66 801 aa22.71■■□□□ 1.23
SCN1B-203ENST00000595652 M0QZQ0 153 aa22.7■■□□□ 1.22
SCN1B-203ENST00000595652 AP5Z1O43299 807 aa22.7■■□□□ 1.22
SCN1B-203ENST00000595652 HUS1O60921 280 aa22.7■■□□□ 1.22
SCN1B-203ENST00000595652 SOD2P04179 222 aa22.7■■□□□ 1.22
SCN1B-203ENST00000595652 ODC1P11926 461 aa22.7■■□□□ 1.22
SCN1B-203ENST00000595652 PAX3P23760 479 aa22.7■■□□□ 1.22
SCN1B-203ENST00000595652 CA8P35219 290 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms