RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 MMRN2Q9H8L6 949 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 LZTS1Q9Y250 596 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 NUB1Q9Y5A7 615 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 FGF18O76093 207 aa18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 PTPN21Q16825 1174 aa18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 SV2CQ496J9 727 aa18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 DDX53Q86TM3 631 aaKnown RBP18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 TMEM173Q86WV6 379 aaPredicted RBP18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 DRC7Q8IY82 874 aa18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 RABGGTAQ92696 567 aa18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 HPDLQ96IR7 371 aa18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 RAB20Q9NX57 234 aa18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 PUF60Q9UHX1 559 aaKnown RBP18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 PLXNA4Q9HCM2 1894 aa18.36■□□□□ 0.53
RPRD1A-209ENST00000590898 SF3B1O75533 1304 aaKnown RBP eCLIP18.36■□□□□ 0.531e-6■■■■■ 37
RPRD1A-209ENST00000590898 KPNA7A9QM74 516 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 H3BNC9 293 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 PPEF2O14830 753 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 HLA-DRAP01903 254 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 ITGB1P05556 798 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 APTXQ7Z2E3 356 aaKnown RBP18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 TMEM130Q8N3G9 435 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 TAS1R2Q8TE23 839 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 FAXDC2Q96IV6 333 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 SUSD3Q96L08 255 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 XYLT2Q9H1B5 865 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 GDAP2Q9NXN4 497 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 CDH23Q9H251 3354 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 ARHGEF37A1IGU5 675 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 ASS1P00966 412 aaKnown RBP18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 CDC25BP30305 580 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 COPB1P53618 953 aaKnown RBP18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 MYL7Q01449 175 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 GPR153Q6NV75 609 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 FUT10Q6P4F1 479 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 RNF168Q8IYW5 571 aaPredicted RBP18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 CCDC150Q8NCX0 1101 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 FBXO22Q8NEZ5 403 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 NAP1L5Q96NT1 182 aaPredicted RBP18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 IMPG2Q9BZV3 1241 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 ZNF576Q9H609 170 aa18.35■□□□□ 0.53
RPRD1A-209ENST00000590898 F8W810 466 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 M0QZQ0 153 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 IGFBP6P24592 240 aaPredicted RBP18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 PIK3CAP42336 1068 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 MYL6P60660 151 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 TIGD5Q53EQ6 642 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 SCARA3Q6AZY7 606 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 DPH6Q7L8W6 267 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 GPR65Q8IYL9 337 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 SPPL3Q8TCT6 385 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 BCL7CQ8WUZ0 217 aaPredicted RBP18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 GPR62Q9BZJ7 368 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 VPS16Q9H269 839 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 TAB2Q9NYJ8 693 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 VWA8A3KMH1 1905 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 MYO7AQ13402 2215 aa18.34■□□□□ 0.53
RPRD1A-209ENST00000590898 SYN3O14994 580 aa18.33■□□□□ 0.53
RPRD1A-209ENST00000590898 SPTLC1O15269 473 aa18.33■□□□□ 0.53
RPRD1A-209ENST00000590898 SERPINC1P01008 464 aa18.33■□□□□ 0.53
RPRD1A-209ENST00000590898 FAM163BP0C2L3 166 aa18.33■□□□□ 0.53
RPRD1A-209ENST00000590898 HS1BP3Q53T59 392 aa18.33■□□□□ 0.53
RPRD1A-209ENST00000590898 SPRED2Q7Z698 418 aa18.33■□□□□ 0.53
RPRD1A-209ENST00000590898 EHBP1Q8NDI1 1231 aa18.33■□□□□ 0.53
RPRD1A-209ENST00000590898 MTUS1Q9ULD2 1270 aa18.33■□□□□ 0.53
RPRD1A-209ENST00000590898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.33■□□□□ 0.53
RPRD1A-209ENST00000590898 SOD2P04179 222 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 UBASH3AP57075 661 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 GPM6BQ13491 265 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 USP41Q3LFD5 358 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 FILIP1LQ4L180 1135 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 HABP4Q5JVS0 413 aaKnown RBP18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 GBP6Q6ZN66 633 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 LMO3Q8TAP4 145 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 HASPINQ8TF76 798 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 SEMA4DQ92854 862 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 SENP8Q96LD8 212 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 CHST7Q9NS84 486 aa18.33■□□□□ 0.52
RPRD1A-209ENST00000590898 SOX1O00570 391 aaPredicted RBP18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 P4HA1P13674 534 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 BRCC3P46736 316 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 EXOC3L4Q17RC7 722 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 ZNF699Q32M78 642 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 WDR72Q3MJ13 1102 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 ZNF667Q5HYK9 610 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 WDR44Q5JSH3 913 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 DSTYKQ6XUX3 929 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 CCDC186Q7Z3E2 898 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 ARNTL2Q8WYA1 636 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 LMAN2LQ9H0V9 348 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 KCNF1Q9H3M0 494 aa18.32■□□□□ 0.52
RPRD1A-209ENST00000590898 LGALS16A8MUM7 142 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 ESPNB1AK53 854 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 PES1O00541 588 aaKnown RBP18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 FGFR3P22607 806 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 BMS1Q14692 1282 aaKnown RBP18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 FKBP15Q5T1M5 1219 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 FAM171A1Q5VUB5 890 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms