RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 C15orf39Q6ZRI6 1047 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 CEP57Q86XR8 500 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 TRIM59Q8IWR1 403 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 SLC35C1Q96A29 364 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 HPDLQ96IR7 371 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 B3GALT6Q96L58 329 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 BPIFA3Q9BQP9 254 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 TTPALQ9BTX7 342 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 CHST7Q9NS84 486 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 SAMSN1Q9NSI8 373 aaKnown RBP20.62■□□□□ 0.89
DDX39A-214ENST00000590556 KPNA7A9QM74 516 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 URODP06132 367 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 POU3F3P20264 500 aaPredicted RBP20.61■□□□□ 0.89
DDX39A-214ENST00000590556 CA8P35219 290 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 AARSP49588 968 aaKnown RBP eCLIP20.61■□□□□ 0.89
DDX39A-214ENST00000590556 ZNF165P49910 485 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 NCOA4Q13772 614 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 SMC1AQ14683 1233 aaKnown RBP20.61■□□□□ 0.89
DDX39A-214ENST00000590556 HSP90AA4PQ58FG1 418 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 KRT39Q6A163 491 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 AUTS2Q8WXX7 1259 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 SENP8Q96LD8 212 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 MRPL17Q9NRX2 175 aaKnown RBP20.61■□□□□ 0.89
DDX39A-214ENST00000590556 PCDHB8Q9UN66 801 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 SSX2IPQ9Y2D8 614 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 PCDHGC5Q9Y5F6 944 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.61■□□□□ 0.89
DDX39A-214ENST00000590556 MTCH2Q9Y6C9 303 aa20.61■□□□□ 0.89
DDX39A-214ENST00000590556 PRRC2BQ5JSZ5 2229 aaKnown RBP20.6■□□□□ 0.89
DDX39A-214ENST00000590556 M0QZQ0 153 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 C2CD2LO14523 706 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 SYN3O14994 580 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 VNN1O95497 513 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 FGFR3P22607 806 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 TKTP29401 623 aaKnown RBP20.6■□□□□ 0.89
DDX39A-214ENST00000590556 ATICP31939 592 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 MTIF2P46199 727 aaKnown RBP20.6■□□□□ 0.89
DDX39A-214ENST00000590556 MXI1P50539 228 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 MYL6P60660 151 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 DSG1Q02413 1049 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 KIAA0319Q5VV43 1072 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 AOPEPQ8N6M6 819 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 MRPL43Q8N983 215 aaKnown RBP20.6■□□□□ 0.89
DDX39A-214ENST00000590556 APPL2Q8NEU8 664 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 RIN2Q8WYP3 895 aaPredicted RBP20.6■□□□□ 0.89
DDX39A-214ENST00000590556 FANCLQ9NW38 375 aa20.6■□□□□ 0.89
DDX39A-214ENST00000590556 SZT2Q5T011 3432 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.59■□□□□ 0.89
DDX39A-214ENST00000590556 ARHGEF37A1IGU5 675 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 SMTNL1A8MU46 457 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 KCNJ18B7U540 433 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 CYB561D2O14569 222 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 CLSTN1O94985 981 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 HLA-DRAP01903 254 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 ODC1P11926 461 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 FOSL2P15408 326 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 PIK3CAP42336 1068 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 KCNJ12Q14500 433 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 PTPN14Q15678 1187 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 RTP2Q5QGT7 225 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 TAS1R2Q8TE23 839 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 VWA8A3KMH1 1905 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 ATG2AQ2TAZ0 1938 aa20.59■□□□□ 0.89
DDX39A-214ENST00000590556 C2orf71A6NGG8 1288 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 HIDE1A8MVS5 230 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 CAVIN2O95810 425 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 FMO5P49326 533 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 KCNH2Q12809 1159 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 SGSM1Q2NKQ1 1148 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 ZNF699Q32M78 642 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 CBWD6Q4V339 395 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 CBWD3Q5JTY5 395 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 CBWD5Q5RIA9 395 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 CDKAL1Q5VV42 579 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 PDXDC1Q6P996 788 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 GPR65Q8IYL9 337 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 PIK3R5Q8WYR1 880 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 XYLT2Q9H1B5 865 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 NSUN3Q9H649 340 aaKnown RBP20.58■□□□□ 0.89
DDX39A-214ENST00000590556 GDAP2Q9NXN4 497 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 SNX9Q9Y5X1 595 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 IRAK3Q9Y616 596 aa20.58■□□□□ 0.89
DDX39A-214ENST00000590556 HUS1O60921 280 aa20.57■□□□□ 0.88
DDX39A-214ENST00000590556 LILRB3O75022 631 aa20.57■□□□□ 0.88
DDX39A-214ENST00000590556 N4BP1O75113 896 aaKnown RBP20.57■□□□□ 0.88
DDX39A-214ENST00000590556 STAU1O95793 577 aaKnown RBP20.57■□□□□ 0.88
DDX39A-214ENST00000590556 AFPP02771 609 aaKnown RBP20.57■□□□□ 0.88
DDX39A-214ENST00000590556 TYMPP19971 482 aa20.57■□□□□ 0.88
DDX39A-214ENST00000590556 EEF1GP26641 437 aaKnown RBP20.57■□□□□ 0.88
DDX39A-214ENST00000590556 MYL7Q01449 175 aa20.57■□□□□ 0.88
DDX39A-214ENST00000590556 CREMQ03060 361 aa20.57■□□□□ 0.88
DDX39A-214ENST00000590556 NCAPHQ15003 741 aa20.57■□□□□ 0.88
DDX39A-214ENST00000590556 TCP11X2Q5H9J9 407 aa20.57■□□□□ 0.88
DDX39A-214ENST00000590556 VARS2Q5ST30 1063 aaKnown RBP20.57■□□□□ 0.88
DDX39A-214ENST00000590556 PRSS55Q6UWB4 352 aaPredicted RBP20.57■□□□□ 0.88
DDX39A-214ENST00000590556 ANKS3Q6ZW76 656 aa20.57■□□□□ 0.88
DDX39A-214ENST00000590556 DHX40Q8IX18 779 aaKnown RBP20.57■□□□□ 0.88
DDX39A-214ENST00000590556 MICALL1Q8N3F8 863 aa20.57■□□□□ 0.88
DDX39A-214ENST00000590556 FBXL13Q8NEE6 735 aa20.57■□□□□ 0.88
DDX39A-214ENST00000590556 LNX1Q8TBB1 728 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms