RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 EFEMP2O95967 443 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 CST3P01034 146 aaPredicted RBP21.07■□□□□ 0.96
CIRBP-220ENST00000588917 TPM2P07951 284 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 TRIM49P0CI25 452 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 TRIM49CP0CI26 452 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 POU3F3P20264 500 aaPredicted RBP21.07■□□□□ 0.96
CIRBP-220ENST00000588917 CDK11BP21127 795 aaKnown RBP21.07■□□□□ 0.96
CIRBP-220ENST00000588917 GCLMP48507 274 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 PPP3CAQ08209 521 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 NCOA4Q13772 614 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 TDRD10Q5VZ19 366 aaKnown RBP21.07■□□□□ 0.96
CIRBP-220ENST00000588917 MICALL1Q8N3F8 863 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 C3orf58Q8NDZ4 430 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 APPL2Q8NEU8 664 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 CXorf38Q8TB03 319 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 MICAL1Q8TDZ2 1067 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 HASPINQ8TF76 798 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 HPDLQ96IR7 371 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 SUSD3Q96L08 255 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 GPR62Q9BZJ7 368 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 IMPG2Q9BZV3 1241 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 SAMSN1Q9NSI8 373 aaKnown RBP21.07■□□□□ 0.96
CIRBP-220ENST00000588917 FANCLQ9NW38 375 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 SIX4Q9UIU6 781 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 KCNJ18B7U540 433 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 M0QZQ0 153 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 SYN3O14994 580 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 AFPP02771 609 aaKnown RBP21.06■□□□□ 0.96
CIRBP-220ENST00000588917 AARSP49588 968 aaKnown RBP eCLIP21.06■□□□□ 0.96
CIRBP-220ENST00000588917 MXI1P50539 228 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 KCNH2Q12809 1159 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 KCNJ12Q14500 433 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 TIGD5Q53EQ6 642 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 TCP11X2Q5H9J9 407 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 FAM171A1Q5VUB5 890 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 CD300LGQ6UXG3 332 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.06■□□□□ 0.96
CIRBP-220ENST00000588917 DPH6Q7L8W6 267 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 RNF168Q8IYW5 571 aaPredicted RBP21.06■□□□□ 0.96
CIRBP-220ENST00000588917 AOPEPQ8N6M6 819 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 FBXL13Q8NEE6 735 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 BCL7CQ8WUZ0 217 aaPredicted RBP21.06■□□□□ 0.96
CIRBP-220ENST00000588917 MRPL38Q96DV4 380 aaKnown RBP21.06■□□□□ 0.96
CIRBP-220ENST00000588917 TTPALQ9BTX7 342 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 HERC2P3Q9BVR0 1158 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 TSPY26PQ9H489 355 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 MRPL17Q9NRX2 175 aaKnown RBP21.06■□□□□ 0.96
CIRBP-220ENST00000588917 CHST7Q9NS84 486 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 DSEQ9UL01 958 aa21.06■□□□□ 0.96
CIRBP-220ENST00000588917 F8W810 466 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 RFXAPO00287 272 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 CXCL14O95715 111 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 FAM163BP0C2L3 166 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 CTSAP10619 480 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 ODC1P11926 461 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 BRCC3P46736 316 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 FMO5P49326 533 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 ZNF445P59923 1031 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 CREMQ03060 361 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 SMC1AQ14683 1233 aaKnown RBP21.05■□□□□ 0.96
CIRBP-220ENST00000588917 CDKAL1Q5VV42 579 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 METTL23Q86XA0 190 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 GDPD5Q8WTR4 605 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 PPP2R3CQ969Q6 453 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 SENP8Q96LD8 212 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 OXCT2Q9BYC2 517 aaPredicted RBP21.05■□□□□ 0.96
CIRBP-220ENST00000588917 MMRN2Q9H8L6 949 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 VRTNQ9H8Y1 702 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 ENTPD7Q9NQZ7 604 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 GDAP2Q9NXN4 497 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 PCDHB8Q9UN66 801 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 COQ4Q9Y3A0 265 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 IRAK3Q9Y616 596 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 MTCH2Q9Y6C9 303 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 ANK1P16157 1881 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 TRIP11Q15643 1979 aa21.05■□□□□ 0.96
CIRBP-220ENST00000588917 TRANK1O15050 2925 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 EPOPA6NHQ4 379 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 CYB561D2O14569 222 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 URODP06132 367 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 P4HA1P13674 534 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 FGFR3P22607 806 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 GLUD2P49448 558 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 NCAPHQ15003 741 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 MAN2A1Q16706 1144 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 AAK1Q2M2I8 961 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 MRPL43Q8N983 215 aaKnown RBP21.04■□□□□ 0.96
CIRBP-220ENST00000588917 FAXDC2Q96IV6 333 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 UHRF1Q96T88 793 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-220ENST00000588917 TCF25Q9BQ70 676 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 TUBGCP2Q9BSJ2 902 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 ZBP1Q9H171 429 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.04■□□□□ 0.96
CIRBP-220ENST00000588917 RAB20Q9NX57 234 aa21.04■□□□□ 0.96
CIRBP-220ENST00000588917 PDCD11Q14690 1871 aaKnown RBP21.03■□□□□ 0.96
CIRBP-220ENST00000588917 GOLGA6L19H0YKK7 550 aa21.03■□□□□ 0.96
CIRBP-220ENST00000588917 H7C4K7 107 aa21.03■□□□□ 0.96
CIRBP-220ENST00000588917 PPEF2O14830 753 aa21.03■□□□□ 0.96
CIRBP-220ENST00000588917 HUS1O60921 280 aa21.03■□□□□ 0.96
CIRBP-220ENST00000588917 HLA-DRAP01903 254 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms