RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 CXCL8P10145 99 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 MSX1P28360 303 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 LIG4P49917 911 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 FAM160A1Q05DH4 1040 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 SOX4Q06945 474 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 SPAG1Q07617 926 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 DSC1Q08554 894 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 NCBP1Q09161 790 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 GPM6BQ13491 265 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 NOLC1Q14978 699 aaKnown RBP eCLIP10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 ENOX2Q16206 610 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 SLC10A6Q3KNW5 377 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 DCAF4L1Q3SXM0 396 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 FAM26FQ5R3K3 315 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 SCARA3Q6AZY7 606 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 KCNT2Q6UVM3 1135 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 CRELD2Q6UXH1 353 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 ALKAL1Q6UXT8 129 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 CLEC17AQ6ZS10 378 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 COLGALT2Q8IYK4 626 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 ABI1Q8IZP0 508 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 SLC39A11Q8N1S5 342 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 SPPL3Q8TCT6 385 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 BICD1Q96G01 975 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 MYO19Q96H55 970 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 CBWD1Q9BRT8 395 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 TCHPQ9BT92 498 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 SAP130Q9H0E3 1048 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 GOLGA2P5Q9HBQ8 144 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 GIT1Q9Y2X7 761 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 STYXL1Q9Y6J8 313 aa10.33□□□□□ -0.76
NPLOC4-219ENST00000576713 PVALEFA0A1B0GWK0 134 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 NRP1O14786 923 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 CLDN3O15551 220 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 FGF18O76093 207 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 EFEMP2O95967 443 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 RPN1P04843 607 aaKnown RBP10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 GALTP07902 379 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 SERPINB4P48594 390 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 ACOT2P49753 483 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 ERVFC1P60507 584 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 AMPD3Q01432 767 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 POSTNQ15063 836 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 XKR4Q5GH76 650 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 COX20Q5RI15 118 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 SPOUT1Q5T280 376 aaKnown RBP10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 C16orf46Q6P387 395 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 CD300LGQ6UXG3 332 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 ADGRD2Q7Z7M1 963 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 NELFCDQ8IXH7 590 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 SMYD4Q8IYR2 804 aaPredicted RBP10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 ZNF507Q8TCN5 953 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 C18orf25Q96B23 403 aaPredicted RBP10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 SNX27Q96L92 541 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 PPP1R10Q96QC0 940 aaKnown RBP10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 GAS2L1Q99501 681 aaPredicted RBP10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 ADPGKQ9BRR6 497 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 PRDM6Q9NQX0 595 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 USP25Q9UHP3 1055 aa10.32□□□□□ -0.76
NPLOC4-219ENST00000576713 SMIM28A0A1B0GU29 152 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 TTC26A0AVF1 554 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 GOLGA6L4A6NEF3 574 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 CASTOR2A6NHX0 329 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 H0YCG3 227 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 F11P03951 625 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 LAG3P18627 525 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 POU3F3P20264 500 aaPredicted RBP10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 GTF2F1P35269 517 aaKnown RBP eCLIP10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 GUCY2FP51841 1108 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 CCDC85BQ15834 202 aaPredicted RBP10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 TAS1R1Q7RTX1 841 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 MICALL1Q8N3F8 863 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 SPATA20Q8TB22 786 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 URGCPQ8TCY9 931 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 POF1BQ8WVV4 589 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 AUTS2Q8WXX7 1259 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 P2RX5Q93086 422 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 HVCN1Q96D96 273 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 SAAL1Q96ER3 474 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 ZNF558Q96NG5 402 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 SAMD11Q96NU1 681 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 ACCSQ96QU6 501 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 PYM1Q9BRP8 204 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 MSTO1Q9BUK6 570 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 MRPL9Q9BYD2 267 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 LRRC27Q9C0I9 530 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 PCIF1Q9H4Z3 704 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 LMBRD1Q9NUN5 540 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 CNTN3Q9P232 1028 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 TUBGCP4Q9UGJ1 667 aa10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 CPSF3Q9UKF6 684 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 PRG3Q9Y2Y8 225 aaPredicted RBP10.31□□□□□ -0.76
NPLOC4-219ENST00000576713 GOLGA8IPA6NC78 632 aa10.3□□□□□ -0.76
NPLOC4-219ENST00000576713 GOLGA8JA6NMD2 632 aa10.3□□□□□ -0.76
NPLOC4-219ENST00000576713 LACTBL1A8MY62 500 aa10.3□□□□□ -0.76
NPLOC4-219ENST00000576713 PPEF2O14830 753 aa10.3□□□□□ -0.76
NPLOC4-219ENST00000576713 CLIC2O15247 247 aa10.3□□□□□ -0.76
NPLOC4-219ENST00000576713 OGTO15294 1046 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms