RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 SCN1AP35498 2009 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 VWA8A3KMH1 1905 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 KPNA7A9QM74 516 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 SLC16A3O15427 465 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 TEX28O15482 410 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 LINC01565O15544 149 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 NCK2O43639 380 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 KRT19P08727 400 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 EPB41P11171 864 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 RPL17P18621 184 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 LTBRP36941 435 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 PNPLA4P41247 253 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 TAF6P49848 677 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 AP3M2P53677 418 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 RBM10P98175 930 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 ENPEPQ07075 957 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 BFSP1Q12934 665 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 SKIV2LQ15477 1246 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 TDRD10Q5VZ19 366 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 RSPO2Q6UXX9 243 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 DSTYKQ6XUX3 929 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 C15orf39Q6ZRI6 1047 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 VN1R2Q8NFZ6 395 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 SLC22A17Q8WUG5 538 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 SENP8Q96LD8 212 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 CEP63Q96MT8 703 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 CLSTN3Q9BQT9 956 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 EMILIN2Q9BXX0 1053 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 FNIP2Q9P278 1114 aa12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 TIMM13Q9Y5L4 95 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-218ENST00000560777 CYB561D2O14569 222 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 ADAM12O43184 909 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 TBC1D4O60343 1298 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 OAZ2O95190 189 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 GLP2RO95838 553 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 KRT13P13646 458 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 KLRC2P26717 231 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 DLX2Q07687 328 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 PPP3CAQ08209 521 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 PSMD5Q16401 504 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 KLHL40Q2TBA0 621 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 ZACNQ401N2 412 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 SV2CQ496J9 727 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 VARS2Q5ST30 1063 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 CAVIN1Q6NZI2 390 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 PDXDC1Q6P996 788 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 TMEM184AQ6ZMB5 413 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 ANKS3Q6ZW76 656 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 SV2AQ7L0J3 742 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 USP37Q86T82 979 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 APPL2Q8NEU8 664 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 HLA-CQ95604 372 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 HPDLQ96IR7 371 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 SRRTQ9BXP5 876 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 CLDND1Q9NY35 253 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 MTRRQ9UBK8 725 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 BACE2Q9Y5Z0 518 aa12.87□□□□□ -0.35
RABGGTA-218ENST00000560777 SPTBN5Q9NRC6 3674 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 PHACTR2O75167 634 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 SLC34A2O95436 690 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 VNN1O95497 513 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 CYP11A1P05108 521 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 ADH1AP07327 375 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 TYMPP19971 482 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 PTMSP20962 102 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 ERCC5P28715 1186 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 GCLMP48507 274 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 CLCN4P51793 760 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 MYL6P60660 151 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 CREMQ03060 361 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 CT47A1Q5JQC4 288 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 LLGL2Q6P1M3 1020 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 LILRA6Q6PI73 481 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 SASS6Q6UVJ0 657 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 FRMD5Q7Z6J6 570 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 PPFIBP1Q86W92 1011 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 PALB2Q86YC2 1186 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 GLYCTKQ8IVS8 523 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 ZNF560Q96MR9 790 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 GDAP2Q9NXN4 497 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 CLEC1BQ9P126 229 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 ARMCX3Q9UH62 379 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 R3HCC1Q9Y3T6 440 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 HCFC2Q9Y5Z7 792 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 XIRP2A4UGR9 3374 aa12.86□□□□□ -0.35
RABGGTA-218ENST00000560777 FSD2A1L4K1 749 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 H7C4K7 107 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 ODC1P11926 461 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 EPCAMP16422 314 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 GTF2H1P32780 548 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 OR1D2P34982 312 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 NDUFV1P49821 464 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 YWHAHQ04917 246 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 MYO1EQ12965 1108 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 BIRC3Q13489 604 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms