RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
TPM1-219ENST00000559397 PAN2Q504Q3 1202 aaKnown RBP17.79■□□□□ 0.44
TPM1-219ENST00000559397 EPC2Q52LR7 807 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 SFMBT2Q5VUG0 894 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 SCARA3Q6AZY7 606 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 SV2AQ7L0J3 742 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 ZNF280BQ86YH2 543 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 CMTR2Q8IYT2 770 aaKnown RBP17.79■□□□□ 0.44
TPM1-219ENST00000559397 EHBP1Q8NDI1 1231 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 ACRBPQ8NEB7 543 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 CXorf38Q8TB03 319 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 ANKRD36BP1Q96IX9 119 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 EIF3CQ99613 913 aaKnown RBP17.79■□□□□ 0.44
TPM1-219ENST00000559397 TMEM8AQ9HCN3 771 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 COQ4Q9Y3A0 265 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 SSU72P8A0A1W2PR75 194 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 B4GALT3O60512 393 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 TMEM191BP0C7N4 346 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 GUCY2FP51841 1108 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 DSC1Q08554 894 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 ZACNQ401N2 412 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 TDRD10Q5VZ19 366 aaKnown RBP17.78■□□□□ 0.44
TPM1-219ENST00000559397 TRAPPC11Q7Z392 1133 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 C1orf127Q8N9H9 656 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 BEST2Q8NFU1 509 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 YME1L1Q96TA2 773 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 MRPL9Q9BYD2 267 aaKnown RBP17.78■□□□□ 0.44
TPM1-219ENST00000559397 GOLGA2P5Q9HBQ8 144 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 SLC38A7Q9NVC3 462 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 HCSTQ9UBK5 93 aa17.78■□□□□ 0.44
TPM1-219ENST00000559397 AJAP1Q9UKB5 411 aaPredicted RBP17.78■□□□□ 0.44
TPM1-219ENST00000559397 XPOTO43592 962 aaKnown RBP17.77■□□□□ 0.44
TPM1-219ENST00000559397 LCA5LO95447 670 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 TNNC2P02585 160 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 SERPING1P05155 500 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 PLEKP08567 350 aaPredicted RBP17.77■□□□□ 0.44
TPM1-219ENST00000559397 MXI1P50539 228 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 CETN1Q12798 172 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 ASTE1Q2TB18 679 aaPredicted RBP17.77■□□□□ 0.44
TPM1-219ENST00000559397 KRT39Q6A163 491 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 IQCEQ6IPM2 695 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 COLGALT2Q8IYK4 626 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 LRRC43Q8N309 656 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 RAD9AQ99638 391 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 CWH43Q9H720 699 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 NRDE2Q9H7Z3 1164 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 DPP3Q9NY33 737 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 SIX4Q9UIU6 781 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 INSL6Q9Y581 213 aa17.77■□□□□ 0.44
TPM1-219ENST00000559397 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.77■□□□□ 0.44
TPM1-219ENST00000559397 RFX1P22670 979 aa17.77■□□□□ 0.43
TPM1-219ENST00000559397 LRPAP1P30533 357 aa17.77■□□□□ 0.43
TPM1-219ENST00000559397 ETF1P62495 437 aaKnown RBP17.77■□□□□ 0.43
TPM1-219ENST00000559397 TUSC3Q13454 348 aa17.77■□□□□ 0.43
TPM1-219ENST00000559397 FAM109BQ6ICB4 259 aaPredicted RBP17.77■□□□□ 0.43
TPM1-219ENST00000559397 ZNF662Q6ZS27 426 aa17.77■□□□□ 0.43
TPM1-219ENST00000559397 IRF2BP2Q7Z5L9 587 aa17.77■□□□□ 0.43
TPM1-219ENST00000559397 SP7Q8TDD2 431 aaPredicted RBP17.77■□□□□ 0.43
TPM1-219ENST00000559397 CCDC42Q96M95 316 aa17.77■□□□□ 0.43
TPM1-219ENST00000559397 ZBED2Q9BTP6 218 aa17.77■□□□□ 0.43
TPM1-219ENST00000559397 CACNG4Q9UBN1 327 aa17.77■□□□□ 0.43
TPM1-219ENST00000559397 APEX2Q9UBZ4 518 aa17.77■□□□□ 0.43
TPM1-219ENST00000559397 LAMA3Q16787 3333 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 ANO9A1A5B4 782 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 GRXCR1A8MXD5 290 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 VNN1O95497 513 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 CST3P01034 146 aaPredicted RBP17.76■□□□□ 0.43
TPM1-219ENST00000559397 ITGB3P05106 788 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 EIF4A3P38919 411 aaKnown RBP17.76■□□□□ 0.43
TPM1-219ENST00000559397 KRT83P78385 493 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 RNASELQ05823 741 aaKnown RBP17.76■□□□□ 0.43
TPM1-219ENST00000559397 RAPGEF1Q13905 1077 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 BTG3Q14201 252 aaPredicted RBP17.76■□□□□ 0.43
TPM1-219ENST00000559397 ASIC2Q16515 512 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 GJB7Q6PEY0 223 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 TDHQ8IZJ6 230 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 PAAF1Q9BRP4 392 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 STK33Q9BYT3 514 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 DNAJB4Q9UDY4 337 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 ITGA11Q9UKX5 1188 aa17.76■□□□□ 0.43
TPM1-219ENST00000559397 GBF1Q92538 1859 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 A0A0U1RQJ8 604 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 CASTOR2A6NHX0 329 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 PIRO00625 290 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 TLL1O43897 1013 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 PRKCIP41743 596 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 ARHGAP25P42331 645 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 CLCNKBP51801 687 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 RABGGTBP53611 331 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 BIRC3Q13489 604 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 UPP1Q16831 310 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 C9orf57Q5W0N0 161 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 PHLDB3Q6NSJ2 640 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 CHRDL2Q6WN34 429 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 TAS1R2Q8TE23 839 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 ATRIPQ8WXE1 791 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 FAM193BQ96PV7 902 aaPredicted RBP17.75■□□□□ 0.43
TPM1-219ENST00000559397 SPAG5Q96R06 1193 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 DNAJC12Q9UKB3 198 aa17.75■□□□□ 0.43
TPM1-219ENST00000559397 MRPL42Q9Y6G3 142 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms