RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 SAR1BQ9Y6B6 198 aa20.92■□□□□ 0.94
RBFOX1-215ENST00000553186 STAU1O95793 577 aaKnown RBP20.91■□□□□ 0.94
RBFOX1-215ENST00000553186 NOP2P46087 812 aaKnown RBP20.91■□□□□ 0.94
RBFOX1-215ENST00000553186 CLEC16AQ2KHT3 1053 aa20.91■□□□□ 0.94
RBFOX1-215ENST00000553186 TPCN2Q8NHX9 752 aa20.91■□□□□ 0.94
RBFOX1-215ENST00000553186 SLC35G2Q8TBE7 412 aa20.91■□□□□ 0.94
RBFOX1-215ENST00000553186 HPDLQ96IR7 371 aa20.91■□□□□ 0.94
RBFOX1-215ENST00000553186 A0A1W2PQ45 241 aaPredicted RBP20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 A0A1W2PQY0 241 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 NFX1Q12986 1120 aaKnown RBP20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 GLRA4Q5JXX5 417 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 SLC43A3Q8NBI5 491 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 ARRDC4Q8NCT1 418 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 TLR10Q9BXR5 811 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 SDCBP2Q9H190 292 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 OSGEPQ9NPF4 335 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 TUBGCP4Q9UGJ1 667 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 CYP1A1P04798 512 aaPredicted RBP20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 CFHP08603 1231 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 KCNE1P15382 129 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 IFI16Q16666 785 aaKnown RBP20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 ACAD10Q6JQN1 1059 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 C18orf25Q96B23 403 aaPredicted RBP20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 CHST12Q9NRB3 414 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 RNF19AQ9NV58 838 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 KLK14Q9P0G3 267 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 SNX12Q9UMY4 172 aa20.9■□□□□ 0.94
RBFOX1-215ENST00000553186 SMIM28A0A1B0GU29 152 aa20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 SRGAP2O75044 1071 aa20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 CDH8P55286 799 aa20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 TCEAL1Q15170 157 aa20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 FAM26DQ5JW98 314 aa20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 FBXO47Q5MNV8 452 aa20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 ZNF606Q8WXB4 792 aa20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 SMYD3Q9H7B4 428 aa20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 PARP2Q9UGN5 583 aa20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 NOD1Q9Y239 953 aa20.89■□□□□ 0.94
RBFOX1-215ENST00000553186 RALGAPA2Q2PPJ7 1873 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 GPR182O15218 404 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 PRLRP16471 622 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 RAP1GAPP47736 663 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 GPC5P78333 572 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 NAA30Q147X3 362 aaPredicted RBP20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 WHAMMP3Q1A5X7 153 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 ZNF394Q53GI3 561 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 SLFN11Q7Z7L1 901 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 ZSWIM1Q9BR11 485 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 ERVK-5Q9HDB9 667 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 COG5Q9UP83 839 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 MYH10P35580 1976 aa20.89■□□□□ 0.93
RBFOX1-215ENST00000553186 NCK2O43639 380 aa20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 FTCDO95954 541 aa20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 YWHAEP62258 255 aaKnown RBP20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 MEI1Q5TIA1 1274 aa20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 BEST2Q8NFU1 509 aa20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 CYFIP2Q96F07 1278 aa20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 TSPAN18Q96SJ8 248 aa20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 CYP3A43Q9HB55 503 aa20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 FAM105AQ9NUU6 356 aa20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 PADI3Q9ULW8 664 aa20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 UBQLN1Q9UMX0 589 aaKnown RBP20.88■□□□□ 0.93
RBFOX1-215ENST00000553186 DYNC1I1O14576 645 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 PPEF2O14830 753 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 THAP12O43422 761 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 HADHBP55084 474 aaKnown RBP20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 MNS1Q8NEH6 495 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 UNC93B1Q9H1C4 597 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 TRPV6Q9H1D0 765 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 GOLPH3Q9H4A6 298 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 STARD7Q9NQZ5 370 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 PHF24Q9UPV7 400 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 TADA3O75528 432 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 GHRP10912 638 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 CD52P31358 61 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 CENPCQ03188 943 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 LPIN1Q14693 890 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 ZNF618Q5T7W0 954 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 TRIM72Q6ZMU5 477 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 RHOT2Q8IXI1 618 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 WHAMMQ8TF30 809 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 BEGAINQ9BUH8 593 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 PTPN22Q9Y2R2 807 aa20.87■□□□□ 0.93
RBFOX1-215ENST00000553186 TRIP11Q15643 1979 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 MEIS3P2A8K0S8 358 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 P4HA1P13674 534 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 LRRC52Q8N7C0 313 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 CPA5Q8WXQ8 436 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 TFAP2BQ92481 460 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 GTF3C4Q9UKN8 822 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 ZNF185O15231 689 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 BUB1BO60566 1050 aaPredicted RBP20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 CAND2O75155 1236 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 CILPO75339 1184 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 CYP1A2P05177 515 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 RAD23BP54727 409 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 NOMO3P69849 1222 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 MYO1EQ12965 1108 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 NAA35Q5VZE5 725 aa20.86■□□□□ 0.93
RBFOX1-215ENST00000553186 C9orf57Q5W0N0 161 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms